Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.53■□□□□ 0.08
Cpsf4Q8BQZ5 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Cpsf4Q8BQZ5 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf4Q8BQZ5 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf4Q8BQZ5 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf4Q8BQZ5 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Cpsf4Q8BQZ5 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf4Q8BQZ5 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cpsf4Q8BQZ5 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf4Q8BQZ5 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf4Q8BQZ5 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf4Q8BQZ5 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf4Q8BQZ5 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf4Q8BQZ5 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf4Q8BQZ5 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpsf4Q8BQZ5 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf4Q8BQZ5 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf4Q8BQZ5 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf4Q8BQZ5 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
Cpsf4Q8BQZ5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf4Q8BQZ5 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf4Q8BQZ5 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf4Q8BQZ5 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf4Q8BQZ5 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Cpsf4Q8BQZ5 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf4Q8BQZ5 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.52■□□□□ 0.08
Cpsf4Q8BQZ5 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf4Q8BQZ5 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Cpsf4Q8BQZ5 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf4Q8BQZ5 Ank2-226ENSMUST00000189368 339 ntBASIC15.52■□□□□ 0.08
Cpsf4Q8BQZ5 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf4Q8BQZ5 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpsf4Q8BQZ5 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.52■□□□□ 0.08
Cpsf4Q8BQZ5 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.52■□□□□ 0.08
Cpsf4Q8BQZ5 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf4Q8BQZ5 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf4Q8BQZ5 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf4Q8BQZ5 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf4Q8BQZ5 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf4Q8BQZ5 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf4Q8BQZ5 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf4Q8BQZ5 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Cpsf4Q8BQZ5 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf4Q8BQZ5 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf4Q8BQZ5 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf4Q8BQZ5 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf4Q8BQZ5 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpsf4Q8BQZ5 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf4Q8BQZ5 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf4Q8BQZ5 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf4Q8BQZ5 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf4Q8BQZ5 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf4Q8BQZ5 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf4Q8BQZ5 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf4Q8BQZ5 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf4Q8BQZ5 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf4Q8BQZ5 Gm14859-201ENSMUST00000117752 357 ntBASIC15.51■□□□□ 0.07
Cpsf4Q8BQZ5 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf4Q8BQZ5 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.51■□□□□ 0.07
Cpsf4Q8BQZ5 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.51■□□□□ 0.07
Cpsf4Q8BQZ5 Gm18421-201ENSMUST00000204122 625 ntBASIC15.51■□□□□ 0.07
Cpsf4Q8BQZ5 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.51■□□□□ 0.07
Cpsf4Q8BQZ5 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf4Q8BQZ5 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf4Q8BQZ5 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Cpsf4Q8BQZ5 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf4Q8BQZ5 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf4Q8BQZ5 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf4Q8BQZ5 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf4Q8BQZ5 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Cpsf4Q8BQZ5 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpsf4Q8BQZ5 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.51■□□□□ 0.07
Cpsf4Q8BQZ5 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4Q8BQZ5 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4Q8BQZ5 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4Q8BQZ5 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4Q8BQZ5 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4Q8BQZ5 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4Q8BQZ5 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.5■□□□□ 0.07
Cpsf4Q8BQZ5 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4Q8BQZ5 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4Q8BQZ5 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4Q8BQZ5 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4Q8BQZ5 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.5■□□□□ 0.07
Cpsf4Q8BQZ5 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4Q8BQZ5 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4Q8BQZ5 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.5■□□□□ 0.07
Cpsf4Q8BQZ5 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4Q8BQZ5 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4Q8BQZ5 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4Q8BQZ5 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4Q8BQZ5 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4Q8BQZ5 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4Q8BQZ5 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.5■□□□□ 0.07
Cpsf4Q8BQZ5 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4Q8BQZ5 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4Q8BQZ5 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4Q8BQZ5 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cpsf4Q8BQZ5 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4Q8BQZ5 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms