Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rab11fip4Q8BQP8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rab11fip4Q8BQP8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab11fip4Q8BQP8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.69■□□□□ 0.42
Rab11fip4Q8BQP8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rab11fip4Q8BQP8 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
Rab11fip4Q8BQP8 Gm28659-201ENSMUST00000188013 759 ntBASIC17.69■□□□□ 0.42
Rab11fip4Q8BQP8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.69■□□□□ 0.42
Rab11fip4Q8BQP8 Mzt1-203ENSMUST00000227948 952 ntBASIC17.69■□□□□ 0.42
Rab11fip4Q8BQP8 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rab11fip4Q8BQP8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab11fip4Q8BQP8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab11fip4Q8BQP8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab11fip4Q8BQP8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab11fip4Q8BQP8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab11fip4Q8BQP8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab11fip4Q8BQP8 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab11fip4Q8BQP8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rab11fip4Q8BQP8 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.69■□□□□ 0.42
Rab11fip4Q8BQP8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip4Q8BQP8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip4Q8BQP8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip4Q8BQP8 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.68■□□□□ 0.42
Rab11fip4Q8BQP8 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip4Q8BQP8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip4Q8BQP8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip4Q8BQP8 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip4Q8BQP8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip4Q8BQP8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip4Q8BQP8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
Rab11fip4Q8BQP8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip4Q8BQP8 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip4Q8BQP8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip4Q8BQP8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.68■□□□□ 0.42
Rab11fip4Q8BQP8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip4Q8BQP8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.68■□□□□ 0.42
Rab11fip4Q8BQP8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.68■□□□□ 0.42
Rab11fip4Q8BQP8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip4Q8BQP8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip4Q8BQP8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip4Q8BQP8 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip4Q8BQP8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rab11fip4Q8BQP8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 Gm43347-201ENSMUST00000200226 580 ntBASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rab11fip4Q8BQP8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip4Q8BQP8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip4Q8BQP8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip4Q8BQP8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip4Q8BQP8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip4Q8BQP8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip4Q8BQP8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip4Q8BQP8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip4Q8BQP8 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rab11fip4Q8BQP8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rab11fip4Q8BQP8 Gm44771-201ENSMUST00000206975 626 ntBASIC17.66■□□□□ 0.42
Rab11fip4Q8BQP8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rab11fip4Q8BQP8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rab11fip4Q8BQP8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip4Q8BQP8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip4Q8BQP8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.66■□□□□ 0.42
Rab11fip4Q8BQP8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip4Q8BQP8 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip4Q8BQP8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip4Q8BQP8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip4Q8BQP8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip4Q8BQP8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip4Q8BQP8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip4Q8BQP8 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip4Q8BQP8 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.66■□□□□ 0.42
Rab11fip4Q8BQP8 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rab11fip4Q8BQP8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip4Q8BQP8 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip4Q8BQP8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rab11fip4Q8BQP8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms