Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdhr3Q8BL00 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdhr3Q8BL00 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdhr3Q8BL00 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdhr3Q8BL00 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Gm13436-201ENSMUST00000120418 567 ntBASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Gm26039-201ENSMUST00000158152 144 ntBASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdhr3Q8BL00 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdhr3Q8BL00 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdhr3Q8BL00 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.96□□□□□ -0.17
Cdhr3Q8BL00 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Cdhr3Q8BL00 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdhr3Q8BL00 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdhr3Q8BL00 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.96□□□□□ -0.17
Cdhr3Q8BL00 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdhr3Q8BL00 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdhr3Q8BL00 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdhr3Q8BL00 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdhr3Q8BL00 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdhr3Q8BL00 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdhr3Q8BL00 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.96□□□□□ -0.17
Cdhr3Q8BL00 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.96□□□□□ -0.17
Cdhr3Q8BL00 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdhr3Q8BL00 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Cdhr3Q8BL00 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdhr3Q8BL00 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdhr3Q8BL00 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdhr3Q8BL00 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdhr3Q8BL00 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.96□□□□□ -0.17
Cdhr3Q8BL00 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.96□□□□□ -0.18
Cdhr3Q8BL00 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Cdhr3Q8BL00 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdhr3Q8BL00 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.96□□□□□ -0.18
Cdhr3Q8BL00 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
Cdhr3Q8BL00 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdhr3Q8BL00 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cdhr3Q8BL00 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.96□□□□□ -0.18
Cdhr3Q8BL00 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cdhr3Q8BL00 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdhr3Q8BL00 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Mir1668-201ENSMUST00000184114 107 ntBASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdhr3Q8BL00 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms