Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nop53Q8BK35 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Nop53Q8BK35 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nop53Q8BK35 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nop53Q8BK35 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.15■□□□□ 0.34
Nop53Q8BK35 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nop53Q8BK35 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.15■□□□□ 0.34
Nop53Q8BK35 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nop53Q8BK35 Gm10566-201ENSMUST00000086739 996 ntBASIC17.15■□□□□ 0.34
Nop53Q8BK35 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nop53Q8BK35 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nop53Q8BK35 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nop53Q8BK35 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nop53Q8BK35 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nop53Q8BK35 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nop53Q8BK35 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nop53Q8BK35 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nop53Q8BK35 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.14■□□□□ 0.33
Nop53Q8BK35 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nop53Q8BK35 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nop53Q8BK35 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nop53Q8BK35 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nop53Q8BK35 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nop53Q8BK35 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nop53Q8BK35 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nop53Q8BK35 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nop53Q8BK35 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.14■□□□□ 0.33
Nop53Q8BK35 Gm10013-201ENSMUST00000106074 672 ntBASIC17.14■□□□□ 0.33
Nop53Q8BK35 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Nop53Q8BK35 Mir5130-201ENSMUST00000175160 84 ntBASIC17.14■□□□□ 0.33
Nop53Q8BK35 Gm36967-201ENSMUST00000193814 266 ntBASIC17.14■□□□□ 0.33
Nop53Q8BK35 Gm29707-201ENSMUST00000196325 491 ntBASIC17.14■□□□□ 0.33
Nop53Q8BK35 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.14■□□□□ 0.33
Nop53Q8BK35 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.14■□□□□ 0.33
Nop53Q8BK35 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nop53Q8BK35 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nop53Q8BK35 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.14■□□□□ 0.33
Nop53Q8BK35 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Nop53Q8BK35 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nop53Q8BK35 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.14■□□□□ 0.33
Nop53Q8BK35 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.14■□□□□ 0.33
Nop53Q8BK35 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nop53Q8BK35 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nop53Q8BK35 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nop53Q8BK35 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nop53Q8BK35 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.13■□□□□ 0.33
Nop53Q8BK35 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nop53Q8BK35 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nop53Q8BK35 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nop53Q8BK35 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nop53Q8BK35 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nop53Q8BK35 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nop53Q8BK35 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nop53Q8BK35 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nop53Q8BK35 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Nop53Q8BK35 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nop53Q8BK35 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.13■□□□□ 0.33
Nop53Q8BK35 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.13■□□□□ 0.33
Nop53Q8BK35 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Nop53Q8BK35 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nop53Q8BK35 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nop53Q8BK35 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nop53Q8BK35 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nop53Q8BK35 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop53Q8BK35 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop53Q8BK35 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop53Q8BK35 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop53Q8BK35 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop53Q8BK35 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop53Q8BK35 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop53Q8BK35 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nop53Q8BK35 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop53Q8BK35 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop53Q8BK35 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop53Q8BK35 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop53Q8BK35 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop53Q8BK35 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.12■□□□□ 0.33
Nop53Q8BK35 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nop53Q8BK35 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop53Q8BK35 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nop53Q8BK35 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop53Q8BK35 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop53Q8BK35 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nop53Q8BK35 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nop53Q8BK35 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nop53Q8BK35 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nop53Q8BK35 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop53Q8BK35 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop53Q8BK35 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.11■□□□□ 0.33
Nop53Q8BK35 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nop53Q8BK35 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop53Q8BK35 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nop53Q8BK35 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nop53Q8BK35 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.11■□□□□ 0.33
Nop53Q8BK35 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop53Q8BK35 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nop53Q8BK35 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.11■□□□□ 0.33
Nop53Q8BK35 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nop53Q8BK35 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop53Q8BK35 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms