Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Chmp2bQ8BJF9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Chmp2bQ8BJF9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Chmp2bQ8BJF9 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.22
Chmp2bQ8BJF9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Chmp2bQ8BJF9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2bQ8BJF9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2bQ8BJF9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2bQ8BJF9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2bQ8BJF9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2bQ8BJF9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.39■□□□□ 0.21
Chmp2bQ8BJF9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2bQ8BJF9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2bQ8BJF9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2bQ8BJF9 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2bQ8BJF9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2bQ8BJF9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.39■□□□□ 0.21
Chmp2bQ8BJF9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2bQ8BJF9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Chmp2bQ8BJF9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2bQ8BJF9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2bQ8BJF9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2bQ8BJF9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2bQ8BJF9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2bQ8BJF9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2bQ8BJF9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2bQ8BJF9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2bQ8BJF9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Chmp2bQ8BJF9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2bQ8BJF9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2bQ8BJF9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.38■□□□□ 0.21
Chmp2bQ8BJF9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2bQ8BJF9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2bQ8BJF9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2bQ8BJF9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2bQ8BJF9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2bQ8BJF9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2bQ8BJF9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.38■□□□□ 0.21
Chmp2bQ8BJF9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chmp2bQ8BJF9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Chmp2bQ8BJF9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.37■□□□□ 0.21
Chmp2bQ8BJF9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2bQ8BJF9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2bQ8BJF9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2bQ8BJF9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2bQ8BJF9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2bQ8BJF9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2bQ8BJF9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.37■□□□□ 0.21
Chmp2bQ8BJF9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.37■□□□□ 0.21
Chmp2bQ8BJF9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2bQ8BJF9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.37■□□□□ 0.21
Chmp2bQ8BJF9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.37■□□□□ 0.21
Chmp2bQ8BJF9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.37■□□□□ 0.21
Chmp2bQ8BJF9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Chmp2bQ8BJF9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2bQ8BJF9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2bQ8BJF9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2bQ8BJF9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2bQ8BJF9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2bQ8BJF9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2bQ8BJF9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chmp2bQ8BJF9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2bQ8BJF9 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.36■□□□□ 0.21
Chmp2bQ8BJF9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.36■□□□□ 0.21
Chmp2bQ8BJF9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2bQ8BJF9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2bQ8BJF9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2bQ8BJF9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2bQ8BJF9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2bQ8BJF9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2bQ8BJF9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2bQ8BJF9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2bQ8BJF9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2bQ8BJF9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.36■□□□□ 0.21
Chmp2bQ8BJF9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Chmp2bQ8BJF9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2bQ8BJF9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2bQ8BJF9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2bQ8BJF9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Chmp2bQ8BJF9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Chmp2bQ8BJF9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Chmp2bQ8BJF9 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.36■□□□□ 0.21
Chmp2bQ8BJF9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2bQ8BJF9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2bQ8BJF9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2bQ8BJF9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chmp2bQ8BJF9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2bQ8BJF9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2bQ8BJF9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2bQ8BJF9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2bQ8BJF9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2bQ8BJF9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2bQ8BJF9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2bQ8BJF9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.35■□□□□ 0.21
Chmp2bQ8BJF9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2bQ8BJF9 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.35■□□□□ 0.21
Chmp2bQ8BJF9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Chmp2bQ8BJF9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2bQ8BJF9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2bQ8BJF9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms