Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh20Q8BIZ0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Pcdh20Q8BIZ0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh20Q8BIZ0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh20Q8BIZ0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Pcdh20Q8BIZ0 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh20Q8BIZ0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh20Q8BIZ0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdh20Q8BIZ0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh20Q8BIZ0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Pcdh20Q8BIZ0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh20Q8BIZ0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh20Q8BIZ0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh20Q8BIZ0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh20Q8BIZ0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh20Q8BIZ0 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh20Q8BIZ0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh20Q8BIZ0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh20Q8BIZ0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh20Q8BIZ0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdh20Q8BIZ0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Gm21362-201ENSMUST00000194272 928 ntBASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh20Q8BIZ0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh20Q8BIZ0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Pcdh20Q8BIZ0 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh20Q8BIZ0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh20Q8BIZ0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh20Q8BIZ0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh20Q8BIZ0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh20Q8BIZ0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.61■□□□□ 0.09
Pcdh20Q8BIZ0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh20Q8BIZ0 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdh20Q8BIZ0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh20Q8BIZ0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdh20Q8BIZ0 Gm37722-201ENSMUST00000193757 208 ntBASIC15.61■□□□□ 0.09
Pcdh20Q8BIZ0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.61■□□□□ 0.09
Pcdh20Q8BIZ0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh20Q8BIZ0 Gm7367-201ENSMUST00000057611 492 ntBASIC15.61■□□□□ 0.09
Pcdh20Q8BIZ0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Pcdh20Q8BIZ0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh20Q8BIZ0 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh20Q8BIZ0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh20Q8BIZ0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh20Q8BIZ0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh20Q8BIZ0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh20Q8BIZ0 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh20Q8BIZ0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh20Q8BIZ0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh20Q8BIZ0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
Pcdh20Q8BIZ0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh20Q8BIZ0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh20Q8BIZ0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh20Q8BIZ0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.6■□□□□ 0.09
Pcdh20Q8BIZ0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh20Q8BIZ0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh20Q8BIZ0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh20Q8BIZ0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh20Q8BIZ0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.6■□□□□ 0.09
Pcdh20Q8BIZ0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh20Q8BIZ0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh20Q8BIZ0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh20Q8BIZ0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.6■□□□□ 0.09
Pcdh20Q8BIZ0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh20Q8BIZ0 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdh20Q8BIZ0 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdh20Q8BIZ0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.6■□□□□ 0.09
Pcdh20Q8BIZ0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh20Q8BIZ0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms