Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf38Q8BI21 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Rnf38Q8BI21 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.45■□□□□ 0.06
Rnf38Q8BI21 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf38Q8BI21 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Rnf38Q8BI21 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf38Q8BI21 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf38Q8BI21 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf38Q8BI21 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Rnf38Q8BI21 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf38Q8BI21 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf38Q8BI21 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf38Q8BI21 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf38Q8BI21 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf38Q8BI21 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rnf38Q8BI21 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Asic1-205ENSMUST00000228185 1818 ntBASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf38Q8BI21 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Gm13474-201ENSMUST00000122466 815 ntBASIC15.43■□□□□ 0.06
Rnf38Q8BI21 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Gm26039-201ENSMUST00000158152 144 ntBASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rnf38Q8BI21 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Rnf38Q8BI21 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Rnf38Q8BI21 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.42■□□□□ 0.06
Rnf38Q8BI21 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.42■□□□□ 0.06
Rnf38Q8BI21 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf38Q8BI21 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Rnf38Q8BI21 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Rnf38Q8BI21 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf38Q8BI21 Gm18959-201ENSMUST00000208954 655 ntBASIC15.42■□□□□ 0.06
Rnf38Q8BI21 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf38Q8BI21 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf38Q8BI21 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf38Q8BI21 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf38Q8BI21 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf38Q8BI21 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf38Q8BI21 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf38Q8BI21 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf38Q8BI21 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf38Q8BI21 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rnf38Q8BI21 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf38Q8BI21 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf38Q8BI21 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf38Q8BI21 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf38Q8BI21 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf38Q8BI21 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rnf38Q8BI21 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Rnf38Q8BI21 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms