Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn3bQ8BHK2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn3bQ8BHK2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.91□□□□□ -0.02
Scn3bQ8BHK2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn3bQ8BHK2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn3bQ8BHK2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Scn3bQ8BHK2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.9□□□□□ -0.02
Scn3bQ8BHK2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Scn3bQ8BHK2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Scn3bQ8BHK2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn3bQ8BHK2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.9□□□□□ -0.02
Scn3bQ8BHK2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.9□□□□□ -0.02
Scn3bQ8BHK2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Scn3bQ8BHK2 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn3bQ8BHK2 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn3bQ8BHK2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn3bQ8BHK2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn3bQ8BHK2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Scn3bQ8BHK2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Scn3bQ8BHK2 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn3bQ8BHK2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.9□□□□□ -0.02
Scn3bQ8BHK2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn3bQ8BHK2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn3bQ8BHK2 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn3bQ8BHK2 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Scn3bQ8BHK2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn3bQ8BHK2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.89□□□□□ -0.03
Scn3bQ8BHK2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn3bQ8BHK2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn3bQ8BHK2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn3bQ8BHK2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn3bQ8BHK2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.89□□□□□ -0.03
Scn3bQ8BHK2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Scn3bQ8BHK2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn3bQ8BHK2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn3bQ8BHK2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Scn3bQ8BHK2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.89□□□□□ -0.03
Scn3bQ8BHK2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn3bQ8BHK2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn3bQ8BHK2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn3bQ8BHK2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn3bQ8BHK2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Scn3bQ8BHK2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn3bQ8BHK2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.89□□□□□ -0.03
Scn3bQ8BHK2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.89□□□□□ -0.03
Scn3bQ8BHK2 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.89□□□□□ -0.03
Scn3bQ8BHK2 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn3bQ8BHK2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Scn3bQ8BHK2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scn3bQ8BHK2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn3bQ8BHK2 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Scn3bQ8BHK2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.88□□□□□ -0.03
Scn3bQ8BHK2 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn3bQ8BHK2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Scn3bQ8BHK2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn3bQ8BHK2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn3bQ8BHK2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn3bQ8BHK2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.88□□□□□ -0.03
Scn3bQ8BHK2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn3bQ8BHK2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Scn3bQ8BHK2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.88□□□□□ -0.03
Scn3bQ8BHK2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scn3bQ8BHK2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.88□□□□□ -0.03
Scn3bQ8BHK2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Scn3bQ8BHK2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 Gm18284-201ENSMUST00000172604 624 ntBASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Scn3bQ8BHK2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Scn3bQ8BHK2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn3bQ8BHK2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Scn3bQ8BHK2 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Scn3bQ8BHK2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.86□□□□□ -0.03
Scn3bQ8BHK2 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms