Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim65Q8BFW4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trim65Q8BFW4 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim65Q8BFW4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim65Q8BFW4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim65Q8BFW4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim65Q8BFW4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim65Q8BFW4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim65Q8BFW4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim65Q8BFW4 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.13■□□□□ 0.33
Trim65Q8BFW4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim65Q8BFW4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim65Q8BFW4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim65Q8BFW4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim65Q8BFW4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim65Q8BFW4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trim65Q8BFW4 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim65Q8BFW4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim65Q8BFW4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim65Q8BFW4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim65Q8BFW4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim65Q8BFW4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim65Q8BFW4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim65Q8BFW4 Gm7284-201ENSMUST00000131667 944 ntBASIC17.13■□□□□ 0.33
Trim65Q8BFW4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trim65Q8BFW4 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.13■□□□□ 0.33
Trim65Q8BFW4 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim65Q8BFW4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim65Q8BFW4 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trim65Q8BFW4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim65Q8BFW4 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim65Q8BFW4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim65Q8BFW4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trim65Q8BFW4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim65Q8BFW4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Trim65Q8BFW4 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim65Q8BFW4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim65Q8BFW4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim65Q8BFW4 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim65Q8BFW4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim65Q8BFW4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim65Q8BFW4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trim65Q8BFW4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim65Q8BFW4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim65Q8BFW4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim65Q8BFW4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trim65Q8BFW4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim65Q8BFW4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.12■□□□□ 0.33
Trim65Q8BFW4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim65Q8BFW4 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim65Q8BFW4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim65Q8BFW4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim65Q8BFW4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim65Q8BFW4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim65Q8BFW4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim65Q8BFW4 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim65Q8BFW4 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.12■□□□□ 0.33
Trim65Q8BFW4 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim65Q8BFW4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim65Q8BFW4 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim65Q8BFW4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Trim65Q8BFW4 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.11■□□□□ 0.33
Trim65Q8BFW4 Gm13312-201ENSMUST00000119631 718 ntBASIC17.11■□□□□ 0.33
Trim65Q8BFW4 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.11■□□□□ 0.33
Trim65Q8BFW4 Mir6404-201ENSMUST00000183699 94 ntBASIC17.11■□□□□ 0.33
Trim65Q8BFW4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.11■□□□□ 0.33
Trim65Q8BFW4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim65Q8BFW4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim65Q8BFW4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim65Q8BFW4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim65Q8BFW4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim65Q8BFW4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim65Q8BFW4 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim65Q8BFW4 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim65Q8BFW4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim65Q8BFW4 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim65Q8BFW4 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trim65Q8BFW4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim65Q8BFW4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim65Q8BFW4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim65Q8BFW4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Trim65Q8BFW4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim65Q8BFW4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim65Q8BFW4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim65Q8BFW4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim65Q8BFW4 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim65Q8BFW4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim65Q8BFW4 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim65Q8BFW4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim65Q8BFW4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim65Q8BFW4 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.1■□□□□ 0.33
Trim65Q8BFW4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim65Q8BFW4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim65Q8BFW4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim65Q8BFW4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim65Q8BFW4 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim65Q8BFW4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim65Q8BFW4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim65Q8BFW4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim65Q8BFW4 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms