Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Gm5745-201ENSMUST00000183748 313 ntBASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Gm18246-201ENSMUST00000221023 728 ntBASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Trnp1Q80ZI1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Trnp1Q80ZI1 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trnp1Q80ZI1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trnp1Q80ZI1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trnp1Q80ZI1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trnp1Q80ZI1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trnp1Q80ZI1 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trnp1Q80ZI1 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.92■□□□□ 0.46
Trnp1Q80ZI1 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Trnp1Q80ZI1 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trnp1Q80ZI1 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.92■□□□□ 0.46
Trnp1Q80ZI1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trnp1Q80ZI1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.92■□□□□ 0.46
Trnp1Q80ZI1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trnp1Q80ZI1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trnp1Q80ZI1 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trnp1Q80ZI1 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.91■□□□□ 0.46
Trnp1Q80ZI1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trnp1Q80ZI1 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trnp1Q80ZI1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trnp1Q80ZI1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trnp1Q80ZI1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trnp1Q80ZI1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trnp1Q80ZI1 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trnp1Q80ZI1 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.91■□□□□ 0.46
Trnp1Q80ZI1 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.91■□□□□ 0.46
Trnp1Q80ZI1 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.91■□□□□ 0.46
Trnp1Q80ZI1 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.91■□□□□ 0.46
Trnp1Q80ZI1 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.91■□□□□ 0.46
Trnp1Q80ZI1 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.91■□□□□ 0.46
Trnp1Q80ZI1 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trnp1Q80ZI1 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trnp1Q80ZI1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trnp1Q80ZI1 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.91■□□□□ 0.46
Trnp1Q80ZI1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trnp1Q80ZI1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Gm22065-201ENSMUST00000103753 110 ntBASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Gm22066-201ENSMUST00000103761 110 ntBASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Gm24932-201ENSMUST00000103763 110 ntBASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Gm24115-201ENSMUST00000103799 110 ntBASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Gm22190-201ENSMUST00000103827 110 ntBASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Gm22191-201ENSMUST00000103831 110 ntBASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Gm24721-201ENSMUST00000103849 110 ntBASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Gm28018-201ENSMUST00000103869 110 ntBASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Gm26399-201ENSMUST00000103937 110 ntBASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Gm25349-201ENSMUST00000177728 110 ntBASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Gm23616-201ENSMUST00000177797 110 ntBASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Gm25871-201ENSMUST00000177816 110 ntBASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Gm24752-201ENSMUST00000178240 110 ntBASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Gm24496-201ENSMUST00000178287 110 ntBASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Gm25649-201ENSMUST00000178476 110 ntBASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Gm25548-201ENSMUST00000178681 110 ntBASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Gm23147-201ENSMUST00000178841 110 ntBASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Gm26095-201ENSMUST00000179270 110 ntBASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Gm22171-201ENSMUST00000179283 110 ntBASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Gm23936-201ENSMUST00000179354 110 ntBASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Gm22619-201ENSMUST00000179516 110 ntBASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Gm25255-201ENSMUST00000179579 110 ntBASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Gm24755-201ENSMUST00000179691 110 ntBASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Gm26506-201ENSMUST00000179692 110 ntBASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Gm25086-201ENSMUST00000179931 110 ntBASIC17.9■□□□□ 0.46
Trnp1Q80ZI1 Gm23243-201ENSMUST00000180047 110 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms