Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vrk1Q80X41 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.22■□□□□ 0.03
Vrk1Q80X41 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vrk1Q80X41 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vrk1Q80X41 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Vrk1Q80X41 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Vrk1Q80X41 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vrk1Q80X41 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Vrk1Q80X41 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vrk1Q80X41 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Vrk1Q80X41 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Vrk1Q80X41 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Vrk1Q80X41 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vrk1Q80X41 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Vrk1Q80X41 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vrk1Q80X41 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vrk1Q80X41 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vrk1Q80X41 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vrk1Q80X41 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vrk1Q80X41 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Vrk1Q80X41 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vrk1Q80X41 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vrk1Q80X41 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vrk1Q80X41 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.21■□□□□ 0.03
Vrk1Q80X41 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vrk1Q80X41 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.21■□□□□ 0.03
Vrk1Q80X41 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vrk1Q80X41 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vrk1Q80X41 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vrk1Q80X41 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vrk1Q80X41 Gm7222-201ENSMUST00000117512 906 ntBASIC15.21■□□□□ 0.03
Vrk1Q80X41 Gm13036-201ENSMUST00000117799 748 ntBASIC15.21■□□□□ 0.03
Vrk1Q80X41 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Vrk1Q80X41 Gm12260-201ENSMUST00000122447 411 ntBASIC15.21■□□□□ 0.03
Vrk1Q80X41 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.21■□□□□ 0.03
Vrk1Q80X41 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Vrk1Q80X41 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vrk1Q80X41 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vrk1Q80X41 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vrk1Q80X41 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.21■□□□□ 0.03
Vrk1Q80X41 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vrk1Q80X41 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vrk1Q80X41 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vrk1Q80X41 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Vrk1Q80X41 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.21■□□□□ 0.02
Vrk1Q80X41 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.2■□□□□ 0.02
Vrk1Q80X41 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Gm14140-201ENSMUST00000119999 995 ntBASIC15.2■□□□□ 0.02
Vrk1Q80X41 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.2■□□□□ 0.02
Vrk1Q80X41 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Gm27628-201ENSMUST00000184911 107 ntBASIC15.2■□□□□ 0.02
Vrk1Q80X41 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vrk1Q80X41 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.2■□□□□ 0.02
Vrk1Q80X41 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Vrk1Q80X41 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.19■□□□□ 0.02
Vrk1Q80X41 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.19■□□□□ 0.02
Vrk1Q80X41 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vrk1Q80X41 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vrk1Q80X41 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vrk1Q80X41 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vrk1Q80X41 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vrk1Q80X41 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vrk1Q80X41 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vrk1Q80X41 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.19■□□□□ 0.02
Vrk1Q80X41 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Vrk1Q80X41 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vrk1Q80X41 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vrk1Q80X41 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vrk1Q80X41 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vrk1Q80X41 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Vrk1Q80X41 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Vrk1Q80X41 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vrk1Q80X41 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vrk1Q80X41 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vrk1Q80X41 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms