Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Gm7213-201ENSMUST00000215977 950 ntBASIC15.45■□□□□ 0.06
Trim36Q80WG7 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim36Q80WG7 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trim36Q80WG7 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim36Q80WG7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim36Q80WG7 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim36Q80WG7 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim36Q80WG7 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.44■□□□□ 0.06
Trim36Q80WG7 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim36Q80WG7 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trim36Q80WG7 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim36Q80WG7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim36Q80WG7 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trim36Q80WG7 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim36Q80WG7 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim36Q80WG7 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trim36Q80WG7 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.44■□□□□ 0.06
Trim36Q80WG7 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.44■□□□□ 0.06
Trim36Q80WG7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim36Q80WG7 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trim36Q80WG7 Gm18958-201ENSMUST00000174258 762 ntBASIC15.44■□□□□ 0.06
Trim36Q80WG7 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trim36Q80WG7 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trim36Q80WG7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim36Q80WG7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim36Q80WG7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim36Q80WG7 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.44■□□□□ 0.06
Trim36Q80WG7 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim36Q80WG7 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim36Q80WG7 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim36Q80WG7 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trim36Q80WG7 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trim36Q80WG7 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim36Q80WG7 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim36Q80WG7 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim36Q80WG7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim36Q80WG7 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim36Q80WG7 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim36Q80WG7 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim36Q80WG7 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim36Q80WG7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim36Q80WG7 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim36Q80WG7 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim36Q80WG7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim36Q80WG7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.43■□□□□ 0.06
Trim36Q80WG7 Gm27389-201ENSMUST00000183622 195 ntBASIC15.43■□□□□ 0.06
Trim36Q80WG7 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.43■□□□□ 0.06
Trim36Q80WG7 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim36Q80WG7 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim36Q80WG7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim36Q80WG7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Trim36Q80WG7 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trim36Q80WG7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.43■□□□□ 0.06
Trim36Q80WG7 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim36Q80WG7 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim36Q80WG7 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Trim36Q80WG7 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trim36Q80WG7 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim36Q80WG7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Trim36Q80WG7 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim36Q80WG7 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.42■□□□□ 0.06
Trim36Q80WG7 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim36Q80WG7 Gm25016-201ENSMUST00000158399 131 ntBASIC15.42■□□□□ 0.06
Trim36Q80WG7 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim36Q80WG7 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.42■□□□□ 0.06
Trim36Q80WG7 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim36Q80WG7 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trim36Q80WG7 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim36Q80WG7 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim36Q80WG7 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim36Q80WG7 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trim36Q80WG7 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim36Q80WG7 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim36Q80WG7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim36Q80WG7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim36Q80WG7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim36Q80WG7 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim36Q80WG7 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim36Q80WG7 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Trim36Q80WG7 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trim36Q80WG7 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim36Q80WG7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim36Q80WG7 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim36Q80WG7 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim36Q80WG7 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim36Q80WG7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.41■□□□□ 0.06
Trim36Q80WG7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim36Q80WG7 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim36Q80WG7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms