Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx55Q6ZPL9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx55Q6ZPL9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx55Q6ZPL9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx55Q6ZPL9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ddx55Q6ZPL9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx55Q6ZPL9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx55Q6ZPL9 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.11■□□□□ 0.49
Ddx55Q6ZPL9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC18.11■□□□□ 0.49
Ddx55Q6ZPL9 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx55Q6ZPL9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx55Q6ZPL9 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.11■□□□□ 0.49
Ddx55Q6ZPL9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx55Q6ZPL9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx55Q6ZPL9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx55Q6ZPL9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx55Q6ZPL9 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.11■□□□□ 0.49
Ddx55Q6ZPL9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.11■□□□□ 0.49
Ddx55Q6ZPL9 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx55Q6ZPL9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.11■□□□□ 0.49
Ddx55Q6ZPL9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx55Q6ZPL9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx55Q6ZPL9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx55Q6ZPL9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx55Q6ZPL9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.1■□□□□ 0.49
Ddx55Q6ZPL9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.1■□□□□ 0.49
Ddx55Q6ZPL9 Gm6226-201ENSMUST00000117765 1146 ntBASIC18.1■□□□□ 0.49
Ddx55Q6ZPL9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx55Q6ZPL9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx55Q6ZPL9 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx55Q6ZPL9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx55Q6ZPL9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
Ddx55Q6ZPL9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx55Q6ZPL9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Ddx55Q6ZPL9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.1■□□□□ 0.49
Ddx55Q6ZPL9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
Ddx55Q6ZPL9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx55Q6ZPL9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx55Q6ZPL9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ddx55Q6ZPL9 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ddx55Q6ZPL9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 Gm11745-201ENSMUST00000121669 448 ntBASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 Gm27321-201ENSMUST00000185021 205 ntBASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Ddx55Q6ZPL9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx55Q6ZPL9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx55Q6ZPL9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx55Q6ZPL9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx55Q6ZPL9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx55Q6ZPL9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx55Q6ZPL9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx55Q6ZPL9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx55Q6ZPL9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ddx55Q6ZPL9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx55Q6ZPL9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Ddx55Q6ZPL9 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC18.08■□□□□ 0.48
Ddx55Q6ZPL9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.08■□□□□ 0.48
Ddx55Q6ZPL9 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx55Q6ZPL9 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.08■□□□□ 0.48
Ddx55Q6ZPL9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx55Q6ZPL9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx55Q6ZPL9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx55Q6ZPL9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx55Q6ZPL9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.08■□□□□ 0.48
Ddx55Q6ZPL9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ddx55Q6ZPL9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx55Q6ZPL9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Ddx55Q6ZPL9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Ddx55Q6ZPL9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx55Q6ZPL9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx55Q6ZPL9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx55Q6ZPL9 Gm13127-201ENSMUST00000118978 1389 ntBASIC18.07■□□□□ 0.48
Ddx55Q6ZPL9 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ddx55Q6ZPL9 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC18.07■□□□□ 0.48
Ddx55Q6ZPL9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Ddx55Q6ZPL9 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms