Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casc1Q6TDU8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casc1Q6TDU8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casc1Q6TDU8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Casc1Q6TDU8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Casc1Q6TDU8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casc1Q6TDU8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Casc1Q6TDU8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Casc1Q6TDU8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casc1Q6TDU8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.11■□□□□ 0.65
Casc1Q6TDU8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casc1Q6TDU8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casc1Q6TDU8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Casc1Q6TDU8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.11■□□□□ 0.65
Casc1Q6TDU8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casc1Q6TDU8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Casc1Q6TDU8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Casc1Q6TDU8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Casc1Q6TDU8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casc1Q6TDU8 Phf7-203ENSMUST00000226565 1971 ntBASIC19.11■□□□□ 0.65
Casc1Q6TDU8 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casc1Q6TDU8 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casc1Q6TDU8 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Casc1Q6TDU8 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Casc1Q6TDU8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.11■□□□□ 0.65
Casc1Q6TDU8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.11■□□□□ 0.65
Casc1Q6TDU8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Casc1Q6TDU8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC19.11■□□□□ 0.65
Casc1Q6TDU8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Casc1Q6TDU8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Casc1Q6TDU8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Casc1Q6TDU8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Casc1Q6TDU8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.1■□□□□ 0.65
Casc1Q6TDU8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.1■□□□□ 0.65
Casc1Q6TDU8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Casc1Q6TDU8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Casc1Q6TDU8 AC133083.1-201ENSMUST00000221736 2209 ntBASIC19.1■□□□□ 0.65
Casc1Q6TDU8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Casc1Q6TDU8 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Casc1Q6TDU8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Casc1Q6TDU8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Casc1Q6TDU8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Casc1Q6TDU8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Casc1Q6TDU8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Casc1Q6TDU8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Casc1Q6TDU8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Casc1Q6TDU8 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Casc1Q6TDU8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.09■□□□□ 0.65
Casc1Q6TDU8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Casc1Q6TDU8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Casc1Q6TDU8 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.09■□□□□ 0.65
Casc1Q6TDU8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.09■□□□□ 0.65
Casc1Q6TDU8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Casc1Q6TDU8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Casc1Q6TDU8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.09■□□□□ 0.65
Casc1Q6TDU8 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Casc1Q6TDU8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.09■□□□□ 0.65
Casc1Q6TDU8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.09■□□□□ 0.65
Casc1Q6TDU8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Casc1Q6TDU8 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Casc1Q6TDU8 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Casc1Q6TDU8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Casc1Q6TDU8 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Casc1Q6TDU8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Casc1Q6TDU8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Casc1Q6TDU8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Casc1Q6TDU8 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Casc1Q6TDU8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Casc1Q6TDU8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Casc1Q6TDU8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Casc1Q6TDU8 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.08■□□□□ 0.65
Casc1Q6TDU8 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Casc1Q6TDU8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Casc1Q6TDU8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Casc1Q6TDU8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Casc1Q6TDU8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.08■□□□□ 0.64
Casc1Q6TDU8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.08■□□□□ 0.64
Casc1Q6TDU8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Casc1Q6TDU8 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.08■□□□□ 0.64
Casc1Q6TDU8 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Casc1Q6TDU8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Casc1Q6TDU8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Casc1Q6TDU8 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Casc1Q6TDU8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Casc1Q6TDU8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Casc1Q6TDU8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Casc1Q6TDU8 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Casc1Q6TDU8 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Casc1Q6TDU8 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Casc1Q6TDU8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Casc1Q6TDU8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Casc1Q6TDU8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Casc1Q6TDU8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Casc1Q6TDU8 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Casc1Q6TDU8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Casc1Q6TDU8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Casc1Q6TDU8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Casc1Q6TDU8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Casc1Q6TDU8 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Casc1Q6TDU8 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms