Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx58Q6Q899 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Ddx58Q6Q899 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx58Q6Q899 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ddx58Q6Q899 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx58Q6Q899 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx58Q6Q899 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.71■□□□□ 0.75
Ddx58Q6Q899 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC19.71■□□□□ 0.75
Ddx58Q6Q899 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx58Q6Q899 AC154222.1-201ENSMUST00000223882 475 ntBASIC19.71■□□□□ 0.75
Ddx58Q6Q899 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx58Q6Q899 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx58Q6Q899 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.71■□□□□ 0.75
Ddx58Q6Q899 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ddx58Q6Q899 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx58Q6Q899 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx58Q6Q899 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC19.71■□□□□ 0.75
Ddx58Q6Q899 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ddx58Q6Q899 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.74
Ddx58Q6Q899 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC19.7■□□□□ 0.74
Ddx58Q6Q899 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Ddx58Q6Q899 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ddx58Q6Q899 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx58Q6Q899 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx58Q6Q899 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.69■□□□□ 0.74
Ddx58Q6Q899 Gm11764-201ENSMUST00000120221 623 ntBASIC19.69■□□□□ 0.74
Ddx58Q6Q899 Gm2308-201ENSMUST00000166539 1004 ntBASIC19.69■□□□□ 0.74
Ddx58Q6Q899 Gm5682-201ENSMUST00000173402 505 ntBASIC19.69■□□□□ 0.74
Ddx58Q6Q899 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.69■□□□□ 0.74
Ddx58Q6Q899 AC093926.2-201ENSMUST00000214468 1228 ntBASIC19.69■□□□□ 0.74
Ddx58Q6Q899 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx58Q6Q899 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx58Q6Q899 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx58Q6Q899 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx58Q6Q899 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx58Q6Q899 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx58Q6Q899 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ddx58Q6Q899 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ddx58Q6Q899 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Ddx58Q6Q899 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx58Q6Q899 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx58Q6Q899 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx58Q6Q899 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx58Q6Q899 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx58Q6Q899 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx58Q6Q899 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx58Q6Q899 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx58Q6Q899 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ddx58Q6Q899 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC19.68■□□□□ 0.74
Ddx58Q6Q899 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC19.68■□□□□ 0.74
Ddx58Q6Q899 AC084391.1-201ENSMUST00000200651 141 ntBASIC19.68■□□□□ 0.74
Ddx58Q6Q899 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx58Q6Q899 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx58Q6Q899 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx58Q6Q899 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx58Q6Q899 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx58Q6Q899 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ddx58Q6Q899 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Ddx58Q6Q899 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx58Q6Q899 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx58Q6Q899 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx58Q6Q899 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx58Q6Q899 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC19.67■□□□□ 0.74
Ddx58Q6Q899 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx58Q6Q899 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx58Q6Q899 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx58Q6Q899 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC19.67■□□□□ 0.74
Ddx58Q6Q899 Gm15358-201ENSMUST00000119249 520 ntBASIC19.67■□□□□ 0.74
Ddx58Q6Q899 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ddx58Q6Q899 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.67■□□□□ 0.74
Ddx58Q6Q899 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.67■□□□□ 0.74
Ddx58Q6Q899 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms