Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rif1Q6PR54 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rif1Q6PR54 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rif1Q6PR54 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rif1Q6PR54 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rif1Q6PR54 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC13.44□□□□□ -0.26
Rif1Q6PR54 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rif1Q6PR54 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC13.44□□□□□ -0.26
Rif1Q6PR54 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rif1Q6PR54 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
Rif1Q6PR54 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Rif1Q6PR54 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rif1Q6PR54 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rif1Q6PR54 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Rif1Q6PR54 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rif1Q6PR54 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rif1Q6PR54 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.44□□□□□ -0.26
Rif1Q6PR54 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.44□□□□□ -0.26
Rif1Q6PR54 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rif1Q6PR54 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rif1Q6PR54 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Rif1Q6PR54 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.43□□□□□ -0.26
Rif1Q6PR54 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Idnk-204ENSMUST00000226010 1898 ntBASIC13.43□□□□□ -0.26
Rif1Q6PR54 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC13.43□□□□□ -0.26
Rif1Q6PR54 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rif1Q6PR54 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rif1Q6PR54 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.43□□□□□ -0.26
Rif1Q6PR54 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rif1Q6PR54 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.42□□□□□ -0.26
Rif1Q6PR54 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Gm8410-201ENSMUST00000117225 605 ntBASIC13.42□□□□□ -0.26
Rif1Q6PR54 Gm17150-201ENSMUST00000165577 381 ntBASIC13.42□□□□□ -0.26
Rif1Q6PR54 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.42□□□□□ -0.26
Rif1Q6PR54 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.42□□□□□ -0.26
Rif1Q6PR54 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.42□□□□□ -0.26
Rif1Q6PR54 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13.42□□□□□ -0.26
Rif1Q6PR54 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.42□□□□□ -0.26
Rif1Q6PR54 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Rif1Q6PR54 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rif1Q6PR54 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rif1Q6PR54 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Rif1Q6PR54 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rif1Q6PR54 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Rif1Q6PR54 Gm38294-201ENSMUST00000192831 381 ntBASIC13.41□□□□□ -0.26
Rif1Q6PR54 Gm10253-201ENSMUST00000194270 940 ntBASIC13.41□□□□□ -0.26
Rif1Q6PR54 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms