Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Nup98Q6PFD9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nup98Q6PFD9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nup98Q6PFD9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nup98Q6PFD9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.69■□□□□ 0.58
Nup98Q6PFD9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Nup98Q6PFD9 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nup98Q6PFD9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nup98Q6PFD9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nup98Q6PFD9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Nup98Q6PFD9 Gm43125-201ENSMUST00000201724 730 ntBASIC18.68■□□□□ 0.58
Nup98Q6PFD9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Nup98Q6PFD9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nup98Q6PFD9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Nup98Q6PFD9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nup98Q6PFD9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nup98Q6PFD9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nup98Q6PFD9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.68■□□□□ 0.58
Nup98Q6PFD9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nup98Q6PFD9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nup98Q6PFD9 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nup98Q6PFD9 Gm8318-201ENSMUST00000182954 872 ntBASIC18.67■□□□□ 0.58
Nup98Q6PFD9 Gm27494-201ENSMUST00000184735 189 ntBASIC18.67■□□□□ 0.58
Nup98Q6PFD9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nup98Q6PFD9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nup98Q6PFD9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nup98Q6PFD9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.67■□□□□ 0.58
Nup98Q6PFD9 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Nup98Q6PFD9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nup98Q6PFD9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nup98Q6PFD9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.67■□□□□ 0.58
Nup98Q6PFD9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nup98Q6PFD9 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.67■□□□□ 0.58
Nup98Q6PFD9 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nup98Q6PFD9 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.67■□□□□ 0.58
Nup98Q6PFD9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Nup98Q6PFD9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Nup98Q6PFD9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nup98Q6PFD9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nup98Q6PFD9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nup98Q6PFD9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Nup98Q6PFD9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nup98Q6PFD9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nup98Q6PFD9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nup98Q6PFD9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Nup98Q6PFD9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nup98Q6PFD9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nup98Q6PFD9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.66■□□□□ 0.58
Nup98Q6PFD9 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.66■□□□□ 0.58
Nup98Q6PFD9 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nup98Q6PFD9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Nup98Q6PFD9 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Nup98Q6PFD9 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nup98Q6PFD9 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC18.66■□□□□ 0.58
Nup98Q6PFD9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nup98Q6PFD9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nup98Q6PFD9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Nup98Q6PFD9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nup98Q6PFD9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nup98Q6PFD9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Nup98Q6PFD9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nup98Q6PFD9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup98Q6PFD9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup98Q6PFD9 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nup98Q6PFD9 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup98Q6PFD9 Gm45612-201ENSMUST00000211320 160 ntBASIC18.65■□□□□ 0.58
Nup98Q6PFD9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup98Q6PFD9 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Nup98Q6PFD9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Nup98Q6PFD9 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.65■□□□□ 0.58
Nup98Q6PFD9 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup98Q6PFD9 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup98Q6PFD9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup98Q6PFD9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nup98Q6PFD9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup98Q6PFD9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup98Q6PFD9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nup98Q6PFD9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup98Q6PFD9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nup98Q6PFD9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Nup98Q6PFD9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.65■□□□□ 0.58
Nup98Q6PFD9 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.65■□□□□ 0.58
Nup98Q6PFD9 AC155252.2-201ENSMUST00000226946 680 ntBASIC18.65■□□□□ 0.58
Nup98Q6PFD9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup98Q6PFD9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nup98Q6PFD9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup98Q6PFD9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.64■□□□□ 0.58
Nup98Q6PFD9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nup98Q6PFD9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nup98Q6PFD9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nup98Q6PFD9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nup98Q6PFD9 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nup98Q6PFD9 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Nup98Q6PFD9 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.64■□□□□ 0.57
Nup98Q6PFD9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nup98Q6PFD9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nup98Q6PFD9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nup98Q6PFD9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.64■□□□□ 0.57
Nup98Q6PFD9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nup98Q6PFD9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms