Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.2■□□□□ 0.02
Rnf220Q6PDX6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.2■□□□□ 0.02
Rnf220Q6PDX6 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf220Q6PDX6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf220Q6PDX6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf220Q6PDX6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Rnf220Q6PDX6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.2■□□□□ 0.02
Rnf220Q6PDX6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.2■□□□□ 0.02
Rnf220Q6PDX6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf220Q6PDX6 Gm18025-201ENSMUST00000221733 862 ntBASIC15.2■□□□□ 0.02
Rnf220Q6PDX6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf220Q6PDX6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf220Q6PDX6 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf220Q6PDX6 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rnf220Q6PDX6 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf220Q6PDX6 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf220Q6PDX6 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf220Q6PDX6 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.2■□□□□ 0.02
Rnf220Q6PDX6 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.2■□□□□ 0.02
Rnf220Q6PDX6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf220Q6PDX6 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf220Q6PDX6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf220Q6PDX6 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf220Q6PDX6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf220Q6PDX6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf220Q6PDX6 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.17■□□□□ 0.02
Rnf220Q6PDX6 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf220Q6PDX6 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf220Q6PDX6 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf220Q6PDX6 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Rnf220Q6PDX6 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rnf220Q6PDX6 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf220Q6PDX6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf220Q6PDX6 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf220Q6PDX6 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Rnf220Q6PDX6 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf220Q6PDX6 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.17■□□□□ 0.02
Rnf220Q6PDX6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.17■□□□□ 0.02
Rnf220Q6PDX6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf220Q6PDX6 Gm27275-201ENSMUST00000184318 272 ntBASIC15.17■□□□□ 0.02
Rnf220Q6PDX6 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf220Q6PDX6 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf220Q6PDX6 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms