Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ShbQ6PD21 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
ShbQ6PD21 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ShbQ6PD21 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ShbQ6PD21 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.18■□□□□ 0.34
ShbQ6PD21 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
ShbQ6PD21 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ShbQ6PD21 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ShbQ6PD21 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ShbQ6PD21 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ShbQ6PD21 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ShbQ6PD21 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ShbQ6PD21 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ShbQ6PD21 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ShbQ6PD21 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
ShbQ6PD21 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ShbQ6PD21 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ShbQ6PD21 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ShbQ6PD21 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
ShbQ6PD21 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.17■□□□□ 0.34
ShbQ6PD21 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.17■□□□□ 0.34
ShbQ6PD21 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
ShbQ6PD21 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.17■□□□□ 0.34
ShbQ6PD21 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.17■□□□□ 0.34
ShbQ6PD21 Mir7684-201ENSMUST00000183858 60 ntBASIC17.17■□□□□ 0.34
ShbQ6PD21 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.17■□□□□ 0.34
ShbQ6PD21 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.17■□□□□ 0.34
ShbQ6PD21 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ShbQ6PD21 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ShbQ6PD21 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ShbQ6PD21 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
ShbQ6PD21 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ShbQ6PD21 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ShbQ6PD21 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ShbQ6PD21 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.16■□□□□ 0.34
ShbQ6PD21 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ShbQ6PD21 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ShbQ6PD21 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ShbQ6PD21 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ShbQ6PD21 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ShbQ6PD21 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ShbQ6PD21 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ShbQ6PD21 Gm6415-201ENSMUST00000118488 348 ntBASIC17.16■□□□□ 0.34
ShbQ6PD21 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.16■□□□□ 0.34
ShbQ6PD21 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.16■□□□□ 0.34
ShbQ6PD21 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ShbQ6PD21 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ShbQ6PD21 Gm17837-201ENSMUST00000186435 985 ntBASIC17.16■□□□□ 0.34
ShbQ6PD21 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ShbQ6PD21 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ShbQ6PD21 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ShbQ6PD21 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ShbQ6PD21 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ShbQ6PD21 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ShbQ6PD21 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ShbQ6PD21 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ShbQ6PD21 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ShbQ6PD21 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ShbQ6PD21 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ShbQ6PD21 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ShbQ6PD21 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ShbQ6PD21 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ShbQ6PD21 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ShbQ6PD21 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ShbQ6PD21 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ShbQ6PD21 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.15■□□□□ 0.34
ShbQ6PD21 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ShbQ6PD21 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.15■□□□□ 0.34
ShbQ6PD21 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.15■□□□□ 0.34
ShbQ6PD21 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.15■□□□□ 0.34
ShbQ6PD21 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ShbQ6PD21 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ShbQ6PD21 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ShbQ6PD21 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ShbQ6PD21 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ShbQ6PD21 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ShbQ6PD21 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ShbQ6PD21 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ShbQ6PD21 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ShbQ6PD21 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ShbQ6PD21 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
ShbQ6PD21 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ShbQ6PD21 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ShbQ6PD21 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ShbQ6PD21 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ShbQ6PD21 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ShbQ6PD21 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.14■□□□□ 0.33
ShbQ6PD21 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ShbQ6PD21 Gm7653-201ENSMUST00000214567 508 ntBASIC17.14■□□□□ 0.33
ShbQ6PD21 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.14■□□□□ 0.33
ShbQ6PD21 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ShbQ6PD21 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ShbQ6PD21 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ShbQ6PD21 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.14■□□□□ 0.33
ShbQ6PD21 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ShbQ6PD21 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ShbQ6PD21 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShbQ6PD21 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShbQ6PD21 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShbQ6PD21 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms