Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarcd3Q6P9Z1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Gm11336-201ENSMUST00000118168 334 ntBASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Gm29707-201ENSMUST00000196325 491 ntBASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarcd3Q6P9Z1 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd3Q6P9Z1 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd3Q6P9Z1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd3Q6P9Z1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd3Q6P9Z1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd3Q6P9Z1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd3Q6P9Z1 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd3Q6P9Z1 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd3Q6P9Z1 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd3Q6P9Z1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd3Q6P9Z1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.68□□□□□ -0.06
Smarcd3Q6P9Z1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd3Q6P9Z1 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Smarcd3Q6P9Z1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd3Q6P9Z1 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd3Q6P9Z1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd3Q6P9Z1 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd3Q6P9Z1 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd3Q6P9Z1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd3Q6P9Z1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarcd3Q6P9Z1 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smarcd3Q6P9Z1 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms