Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smchd1Q6P5D8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smchd1Q6P5D8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smchd1Q6P5D8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smchd1Q6P5D8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smchd1Q6P5D8 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.48■□□□□ 0.39
Smchd1Q6P5D8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.48■□□□□ 0.39
Smchd1Q6P5D8 Gm14494-201ENSMUST00000118786 435 ntBASIC17.48■□□□□ 0.39
Smchd1Q6P5D8 Gm25911-201ENSMUST00000157621 56 ntBASIC17.48■□□□□ 0.39
Smchd1Q6P5D8 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Smchd1Q6P5D8 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.48■□□□□ 0.39
Smchd1Q6P5D8 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smchd1Q6P5D8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smchd1Q6P5D8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smchd1Q6P5D8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smchd1Q6P5D8 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smchd1Q6P5D8 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smchd1Q6P5D8 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smchd1Q6P5D8 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.47■□□□□ 0.39
Smchd1Q6P5D8 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smchd1Q6P5D8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.47■□□□□ 0.39
Smchd1Q6P5D8 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smchd1Q6P5D8 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smchd1Q6P5D8 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smchd1Q6P5D8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smchd1Q6P5D8 Gm18622-201ENSMUST00000219361 595 ntBASIC17.47■□□□□ 0.39
Smchd1Q6P5D8 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smchd1Q6P5D8 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Smchd1Q6P5D8 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Smchd1Q6P5D8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smchd1Q6P5D8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.46■□□□□ 0.39
Smchd1Q6P5D8 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smchd1Q6P5D8 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smchd1Q6P5D8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smchd1Q6P5D8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smchd1Q6P5D8 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smchd1Q6P5D8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smchd1Q6P5D8 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Smchd1Q6P5D8 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.46■□□□□ 0.39
Smchd1Q6P5D8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.46■□□□□ 0.39
Smchd1Q6P5D8 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.46■□□□□ 0.39
Smchd1Q6P5D8 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.46■□□□□ 0.39
Smchd1Q6P5D8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smchd1Q6P5D8 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smchd1Q6P5D8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smchd1Q6P5D8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smchd1Q6P5D8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smchd1Q6P5D8 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smchd1Q6P5D8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smchd1Q6P5D8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.46■□□□□ 0.39
Smchd1Q6P5D8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Smchd1Q6P5D8 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.45■□□□□ 0.38
Smchd1Q6P5D8 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.45■□□□□ 0.38
Smchd1Q6P5D8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Smchd1Q6P5D8 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smchd1Q6P5D8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smchd1Q6P5D8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smchd1Q6P5D8 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.45■□□□□ 0.38
Smchd1Q6P5D8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smchd1Q6P5D8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smchd1Q6P5D8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smchd1Q6P5D8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smchd1Q6P5D8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.45■□□□□ 0.38
Smchd1Q6P5D8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smchd1Q6P5D8 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smchd1Q6P5D8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smchd1Q6P5D8 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smchd1Q6P5D8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smchd1Q6P5D8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.45■□□□□ 0.38
Smchd1Q6P5D8 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.45■□□□□ 0.38
Smchd1Q6P5D8 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
Smchd1Q6P5D8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smchd1Q6P5D8 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smchd1Q6P5D8 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smchd1Q6P5D8 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smchd1Q6P5D8 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smchd1Q6P5D8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smchd1Q6P5D8 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smchd1Q6P5D8 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smchd1Q6P5D8 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smchd1Q6P5D8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smchd1Q6P5D8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smchd1Q6P5D8 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smchd1Q6P5D8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Smchd1Q6P5D8 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smchd1Q6P5D8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smchd1Q6P5D8 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Smchd1Q6P5D8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smchd1Q6P5D8 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smchd1Q6P5D8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smchd1Q6P5D8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smchd1Q6P5D8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smchd1Q6P5D8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
Smchd1Q6P5D8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smchd1Q6P5D8 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smchd1Q6P5D8 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smchd1Q6P5D8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.43■□□□□ 0.38
Smchd1Q6P5D8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smchd1Q6P5D8 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.43■□□□□ 0.38
Smchd1Q6P5D8 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms