Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rtl3Q6P1Y1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtl3Q6P1Y1 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Rtl3Q6P1Y1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.48■□□□□ 0.23
Rtl3Q6P1Y1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rtl3Q6P1Y1 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rtl3Q6P1Y1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Rtl3Q6P1Y1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.48■□□□□ 0.23
Rtl3Q6P1Y1 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.48■□□□□ 0.23
Rtl3Q6P1Y1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Rtl3Q6P1Y1 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.48■□□□□ 0.23
Rtl3Q6P1Y1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.48■□□□□ 0.23
Rtl3Q6P1Y1 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rtl3Q6P1Y1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtl3Q6P1Y1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtl3Q6P1Y1 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtl3Q6P1Y1 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtl3Q6P1Y1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Rtl3Q6P1Y1 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Rtl3Q6P1Y1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Rtl3Q6P1Y1 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Rtl3Q6P1Y1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtl3Q6P1Y1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtl3Q6P1Y1 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Rtl3Q6P1Y1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtl3Q6P1Y1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Rtl3Q6P1Y1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.47■□□□□ 0.23
Rtl3Q6P1Y1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.47■□□□□ 0.23
Rtl3Q6P1Y1 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.47■□□□□ 0.23
Rtl3Q6P1Y1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rtl3Q6P1Y1 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.47■□□□□ 0.23
Rtl3Q6P1Y1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Rtl3Q6P1Y1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
Rtl3Q6P1Y1 Mir6404-201ENSMUST00000183699 94 ntBASIC16.47■□□□□ 0.23
Rtl3Q6P1Y1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.47■□□□□ 0.23
Rtl3Q6P1Y1 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
Rtl3Q6P1Y1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.47■□□□□ 0.23
Rtl3Q6P1Y1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Rtl3Q6P1Y1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtl3Q6P1Y1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rtl3Q6P1Y1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtl3Q6P1Y1 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtl3Q6P1Y1 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtl3Q6P1Y1 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtl3Q6P1Y1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rtl3Q6P1Y1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rtl3Q6P1Y1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Rtl3Q6P1Y1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Rtl3Q6P1Y1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtl3Q6P1Y1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
Rtl3Q6P1Y1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtl3Q6P1Y1 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Rtl3Q6P1Y1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rtl3Q6P1Y1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtl3Q6P1Y1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtl3Q6P1Y1 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rtl3Q6P1Y1 Gm25745-201ENSMUST00000174945 133 ntBASIC16.46■□□□□ 0.23
Rtl3Q6P1Y1 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rtl3Q6P1Y1 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.46■□□□□ 0.23
Rtl3Q6P1Y1 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Rtl3Q6P1Y1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.46■□□□□ 0.23
Rtl3Q6P1Y1 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtl3Q6P1Y1 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Rtl3Q6P1Y1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtl3Q6P1Y1 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtl3Q6P1Y1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rtl3Q6P1Y1 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.46■□□□□ 0.22
Rtl3Q6P1Y1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Rtl3Q6P1Y1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rtl3Q6P1Y1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl3Q6P1Y1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl3Q6P1Y1 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl3Q6P1Y1 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.45■□□□□ 0.22
Rtl3Q6P1Y1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Rtl3Q6P1Y1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl3Q6P1Y1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl3Q6P1Y1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl3Q6P1Y1 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl3Q6P1Y1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Rtl3Q6P1Y1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl3Q6P1Y1 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.45■□□□□ 0.22
Rtl3Q6P1Y1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl3Q6P1Y1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.45■□□□□ 0.22
Rtl3Q6P1Y1 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl3Q6P1Y1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.45■□□□□ 0.22
Rtl3Q6P1Y1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl3Q6P1Y1 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Rtl3Q6P1Y1 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl3Q6P1Y1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl3Q6P1Y1 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl3Q6P1Y1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl3Q6P1Y1 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl3Q6P1Y1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl3Q6P1Y1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Rtl3Q6P1Y1 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl3Q6P1Y1 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rtl3Q6P1Y1 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
Rtl3Q6P1Y1 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtl3Q6P1Y1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rtl3Q6P1Y1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms