Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac4Q6NZM9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac4Q6NZM9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac4Q6NZM9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.87■□□□□ 0.45
Hdac4Q6NZM9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac4Q6NZM9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac4Q6NZM9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac4Q6NZM9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac4Q6NZM9 Prob1-201ENSMUST00000097619 3021 ntBASIC17.87■□□□□ 0.45
Hdac4Q6NZM9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac4Q6NZM9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hdac4Q6NZM9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac4Q6NZM9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Hdac4Q6NZM9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac4Q6NZM9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac4Q6NZM9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac4Q6NZM9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac4Q6NZM9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac4Q6NZM9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Hdac4Q6NZM9 Gm6257-201ENSMUST00000163864 910 ntBASIC17.86■□□□□ 0.45
Hdac4Q6NZM9 Gm27704-201ENSMUST00000185094 107 ntBASIC17.86■□□□□ 0.45
Hdac4Q6NZM9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.86■□□□□ 0.45
Hdac4Q6NZM9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac4Q6NZM9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac4Q6NZM9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac4Q6NZM9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac4Q6NZM9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.86■□□□□ 0.45
Hdac4Q6NZM9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Hdac4Q6NZM9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Hdac4Q6NZM9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Hdac4Q6NZM9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac4Q6NZM9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac4Q6NZM9 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.86■□□□□ 0.45
Hdac4Q6NZM9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac4Q6NZM9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac4Q6NZM9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac4Q6NZM9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hdac4Q6NZM9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac4Q6NZM9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac4Q6NZM9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac4Q6NZM9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac4Q6NZM9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Hdac4Q6NZM9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac4Q6NZM9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac4Q6NZM9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac4Q6NZM9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac4Q6NZM9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Hdac4Q6NZM9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac4Q6NZM9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac4Q6NZM9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Hdac4Q6NZM9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac4Q6NZM9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac4Q6NZM9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.85■□□□□ 0.45
Hdac4Q6NZM9 Gm33142-201ENSMUST00000193913 867 ntBASIC17.85■□□□□ 0.45
Hdac4Q6NZM9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac4Q6NZM9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac4Q6NZM9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.85■□□□□ 0.45
Hdac4Q6NZM9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.85■□□□□ 0.45
Hdac4Q6NZM9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac4Q6NZM9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac4Q6NZM9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Hdac4Q6NZM9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac4Q6NZM9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac4Q6NZM9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hdac4Q6NZM9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac4Q6NZM9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac4Q6NZM9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac4Q6NZM9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac4Q6NZM9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac4Q6NZM9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac4Q6NZM9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac4Q6NZM9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac4Q6NZM9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.84■□□□□ 0.45
Hdac4Q6NZM9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.84■□□□□ 0.45
Hdac4Q6NZM9 Gm25406-201ENSMUST00000157599 105 ntBASIC17.84■□□□□ 0.45
Hdac4Q6NZM9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac4Q6NZM9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac4Q6NZM9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac4Q6NZM9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac4Q6NZM9 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.84■□□□□ 0.45
Hdac4Q6NZM9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac4Q6NZM9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac4Q6NZM9 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac4Q6NZM9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Hdac4Q6NZM9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac4Q6NZM9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hdac4Q6NZM9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Hdac4Q6NZM9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac4Q6NZM9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.83■□□□□ 0.44
Hdac4Q6NZM9 Gm7284-201ENSMUST00000131667 944 ntBASIC17.83■□□□□ 0.44
Hdac4Q6NZM9 Rprl3-201ENSMUST00000157400 290 ntBASIC17.83■□□□□ 0.44
Hdac4Q6NZM9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.83■□□□□ 0.44
Hdac4Q6NZM9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac4Q6NZM9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.83■□□□□ 0.44
Hdac4Q6NZM9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Hdac4Q6NZM9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Hdac4Q6NZM9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac4Q6NZM9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac4Q6NZM9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac4Q6NZM9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms