Protein–RNA interactions for Protein: Q6A026

Pds5a, Sister chromatid cohesion protein PDS5 homolog A, mousemouse

Predictions only

Length 1,332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5aQ6A026 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pds5aQ6A026 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
Pds5aQ6A026 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Pds5aQ6A026 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pds5aQ6A026 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pds5aQ6A026 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pds5aQ6A026 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pds5aQ6A026 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pds5aQ6A026 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pds5aQ6A026 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pds5aQ6A026 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pds5aQ6A026 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.16■□□□□ 0.34
Pds5aQ6A026 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pds5aQ6A026 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.16■□□□□ 0.34
Pds5aQ6A026 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pds5aQ6A026 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Pds5aQ6A026 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.16■□□□□ 0.34
Pds5aQ6A026 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pds5aQ6A026 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pds5aQ6A026 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pds5aQ6A026 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pds5aQ6A026 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pds5aQ6A026 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pds5aQ6A026 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pds5aQ6A026 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pds5aQ6A026 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Pds5aQ6A026 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pds5aQ6A026 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pds5aQ6A026 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pds5aQ6A026 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pds5aQ6A026 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Pds5aQ6A026 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pds5aQ6A026 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pds5aQ6A026 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Pds5aQ6A026 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
Pds5aQ6A026 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.15■□□□□ 0.34
Pds5aQ6A026 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pds5aQ6A026 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.15■□□□□ 0.34
Pds5aQ6A026 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pds5aQ6A026 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.15■□□□□ 0.34
Pds5aQ6A026 Gm6257-201ENSMUST00000163864 910 ntBASIC17.15■□□□□ 0.34
Pds5aQ6A026 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.15■□□□□ 0.34
Pds5aQ6A026 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pds5aQ6A026 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Pds5aQ6A026 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pds5aQ6A026 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.34
Pds5aQ6A026 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Pds5aQ6A026 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pds5aQ6A026 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pds5aQ6A026 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pds5aQ6A026 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pds5aQ6A026 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pds5aQ6A026 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pds5aQ6A026 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.14■□□□□ 0.33
Pds5aQ6A026 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Pds5aQ6A026 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.14■□□□□ 0.33
Pds5aQ6A026 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pds5aQ6A026 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.14■□□□□ 0.33
Pds5aQ6A026 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.14■□□□□ 0.33
Pds5aQ6A026 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.14■□□□□ 0.33
Pds5aQ6A026 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pds5aQ6A026 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pds5aQ6A026 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pds5aQ6A026 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pds5aQ6A026 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pds5aQ6A026 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pds5aQ6A026 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.14■□□□□ 0.33
Pds5aQ6A026 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pds5aQ6A026 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pds5aQ6A026 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pds5aQ6A026 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Pds5aQ6A026 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pds5aQ6A026 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pds5aQ6A026 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pds5aQ6A026 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Pds5aQ6A026 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.13■□□□□ 0.33
Pds5aQ6A026 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pds5aQ6A026 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pds5aQ6A026 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pds5aQ6A026 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Pds5aQ6A026 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pds5aQ6A026 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.13■□□□□ 0.33
Pds5aQ6A026 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pds5aQ6A026 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.13■□□□□ 0.33
Pds5aQ6A026 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pds5aQ6A026 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pds5aQ6A026 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pds5aQ6A026 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pds5aQ6A026 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pds5aQ6A026 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pds5aQ6A026 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.12■□□□□ 0.33
Pds5aQ6A026 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pds5aQ6A026 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pds5aQ6A026 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pds5aQ6A026 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
Pds5aQ6A026 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pds5aQ6A026 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.12■□□□□ 0.33
Pds5aQ6A026 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pds5aQ6A026 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Pds5aQ6A026 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms