Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pdzrn3Q69ZS0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pdzrn3Q69ZS0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pdzrn3Q69ZS0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pdzrn3Q69ZS0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pdzrn3Q69ZS0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdzrn3Q69ZS0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pdzrn3Q69ZS0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdzrn3Q69ZS0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdzrn3Q69ZS0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdzrn3Q69ZS0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Pdzrn3Q69ZS0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pdzrn3Q69ZS0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdzrn3Q69ZS0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdzrn3Q69ZS0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.54■□□□□ 0.72
Pdzrn3Q69ZS0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pdzrn3Q69ZS0 Gm2756-201ENSMUST00000195851 400 ntBASIC19.54■□□□□ 0.72
Pdzrn3Q69ZS0 Gm6089-201ENSMUST00000197666 938 ntBASIC19.54■□□□□ 0.72
Pdzrn3Q69ZS0 AC154222.1-201ENSMUST00000223882 475 ntBASIC19.54■□□□□ 0.72
Pdzrn3Q69ZS0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdzrn3Q69ZS0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pdzrn3Q69ZS0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdzrn3Q69ZS0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdzrn3Q69ZS0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdzrn3Q69ZS0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdzrn3Q69ZS0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdzrn3Q69ZS0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdzrn3Q69ZS0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC19.54■□□□□ 0.72
Pdzrn3Q69ZS0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdzrn3Q69ZS0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Pdzrn3Q69ZS0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Pdzrn3Q69ZS0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pdzrn3Q69ZS0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdzrn3Q69ZS0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdzrn3Q69ZS0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pdzrn3Q69ZS0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC19.53■□□□□ 0.72
Pdzrn3Q69ZS0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.53■□□□□ 0.72
Pdzrn3Q69ZS0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC19.53■□□□□ 0.72
Pdzrn3Q69ZS0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Pdzrn3Q69ZS0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pdzrn3Q69ZS0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Pdzrn3Q69ZS0 Gm6550-201ENSMUST00000187574 993 ntBASIC19.53■□□□□ 0.72
Pdzrn3Q69ZS0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdzrn3Q69ZS0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC19.53■□□□□ 0.72
Pdzrn3Q69ZS0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdzrn3Q69ZS0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdzrn3Q69ZS0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pdzrn3Q69ZS0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pdzrn3Q69ZS0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pdzrn3Q69ZS0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
Pdzrn3Q69ZS0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdzrn3Q69ZS0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdzrn3Q69ZS0 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdzrn3Q69ZS0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdzrn3Q69ZS0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdzrn3Q69ZS0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdzrn3Q69ZS0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdzrn3Q69ZS0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pdzrn3Q69ZS0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdzrn3Q69ZS0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Pdzrn3Q69ZS0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdzrn3Q69ZS0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdzrn3Q69ZS0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdzrn3Q69ZS0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdzrn3Q69ZS0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdzrn3Q69ZS0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdzrn3Q69ZS0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Pdzrn3Q69ZS0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdzrn3Q69ZS0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdzrn3Q69ZS0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC19.52■□□□□ 0.72
Pdzrn3Q69ZS0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdzrn3Q69ZS0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.52■□□□□ 0.72
Pdzrn3Q69ZS0 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdzrn3Q69ZS0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Pdzrn3Q69ZS0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdzrn3Q69ZS0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.51■□□□□ 0.71
Pdzrn3Q69ZS0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdzrn3Q69ZS0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Pdzrn3Q69ZS0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdzrn3Q69ZS0 Gm8097-201ENSMUST00000117903 829 ntBASIC19.51■□□□□ 0.71
Pdzrn3Q69ZS0 Gm4459-201ENSMUST00000118750 468 ntBASIC19.51■□□□□ 0.71
Pdzrn3Q69ZS0 Gm12260-201ENSMUST00000122447 411 ntBASIC19.51■□□□□ 0.71
Pdzrn3Q69ZS0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pdzrn3Q69ZS0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Pdzrn3Q69ZS0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdzrn3Q69ZS0 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.51■□□□□ 0.71
Pdzrn3Q69ZS0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdzrn3Q69ZS0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdzrn3Q69ZS0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdzrn3Q69ZS0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdzrn3Q69ZS0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.51■□□□□ 0.71
Pdzrn3Q69ZS0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pdzrn3Q69ZS0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdzrn3Q69ZS0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pdzrn3Q69ZS0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pdzrn3Q69ZS0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.51■□□□□ 0.71
Pdzrn3Q69ZS0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.5■□□□□ 0.71
Pdzrn3Q69ZS0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pdzrn3Q69ZS0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pdzrn3Q69ZS0 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms