Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Scube3Q66PY1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.75■□□□□ 0.27
Scube3Q66PY1 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Scube3Q66PY1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scube3Q66PY1 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scube3Q66PY1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scube3Q66PY1 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scube3Q66PY1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scube3Q66PY1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.75■□□□□ 0.27
Scube3Q66PY1 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scube3Q66PY1 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.75■□□□□ 0.27
Scube3Q66PY1 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Scube3Q66PY1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Scube3Q66PY1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scube3Q66PY1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scube3Q66PY1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Scube3Q66PY1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scube3Q66PY1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scube3Q66PY1 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scube3Q66PY1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scube3Q66PY1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scube3Q66PY1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.74■□□□□ 0.27
Scube3Q66PY1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.74■□□□□ 0.27
Scube3Q66PY1 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC16.74■□□□□ 0.27
Scube3Q66PY1 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scube3Q66PY1 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scube3Q66PY1 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scube3Q66PY1 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Scube3Q66PY1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scube3Q66PY1 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scube3Q66PY1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scube3Q66PY1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scube3Q66PY1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Scube3Q66PY1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Scube3Q66PY1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.73■□□□□ 0.27
Scube3Q66PY1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.73■□□□□ 0.27
Scube3Q66PY1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.73■□□□□ 0.27
Scube3Q66PY1 Gm44771-201ENSMUST00000206975 626 ntBASIC16.73■□□□□ 0.27
Scube3Q66PY1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.73■□□□□ 0.27
Scube3Q66PY1 AC153937.1-201ENSMUST00000218734 412 ntBASIC16.73■□□□□ 0.27
Scube3Q66PY1 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scube3Q66PY1 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scube3Q66PY1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scube3Q66PY1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scube3Q66PY1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scube3Q66PY1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scube3Q66PY1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scube3Q66PY1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scube3Q66PY1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Scube3Q66PY1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.72■□□□□ 0.27
Scube3Q66PY1 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scube3Q66PY1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scube3Q66PY1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scube3Q66PY1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Scube3Q66PY1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scube3Q66PY1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scube3Q66PY1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scube3Q66PY1 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scube3Q66PY1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scube3Q66PY1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scube3Q66PY1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scube3Q66PY1 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.72■□□□□ 0.27
Scube3Q66PY1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scube3Q66PY1 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Scube3Q66PY1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Scube3Q66PY1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scube3Q66PY1 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms