Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clcn1Q64347 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC20.14■□□□□ 0.81
Clcn1Q64347 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC20.14■□□□□ 0.81
Clcn1Q64347 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC20.14■□□□□ 0.81
Clcn1Q64347 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC20.14■□□□□ 0.81
Clcn1Q64347 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clcn1Q64347 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clcn1Q64347 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clcn1Q64347 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clcn1Q64347 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Clcn1Q64347 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Clcn1Q64347 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clcn1Q64347 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcn1Q64347 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Clcn1Q64347 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcn1Q64347 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcn1Q64347 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Clcn1Q64347 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.13■□□□□ 0.81
Clcn1Q64347 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Clcn1Q64347 Gm4609-201ENSMUST00000106443 1002 ntBASIC20.13■□□□□ 0.81
Clcn1Q64347 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcn1Q64347 Gm5138-201ENSMUST00000113842 1002 ntBASIC20.13■□□□□ 0.81
Clcn1Q64347 Gm15191-201ENSMUST00000117933 1000 ntBASIC20.13■□□□□ 0.81
Clcn1Q64347 Gm12182-201ENSMUST00000118655 1008 ntBASIC20.13■□□□□ 0.81
Clcn1Q64347 Gm13882-201ENSMUST00000120886 1002 ntBASIC20.13■□□□□ 0.81
Clcn1Q64347 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC20.13■□□□□ 0.81
Clcn1Q64347 Gm10284-201ENSMUST00000145057 1005 ntBASIC20.13■□□□□ 0.81
Clcn1Q64347 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcn1Q64347 Mir3113-201ENSMUST00000175478 76 ntBASIC20.13■□□□□ 0.81
Clcn1Q64347 Gm10481-201ENSMUST00000179228 1002 ntBASIC20.13■□□□□ 0.81
Clcn1Q64347 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC20.13■□□□□ 0.81
Clcn1Q64347 Gm2574-201ENSMUST00000181051 1002 ntBASIC20.13■□□□□ 0.81
Clcn1Q64347 Gm3200-201ENSMUST00000181493 1002 ntBASIC20.13■□□□□ 0.81
Clcn1Q64347 Gm8825-201ENSMUST00000182565 998 ntBASIC20.13■□□□□ 0.81
Clcn1Q64347 Gm4518-201ENSMUST00000182638 718 ntBASIC20.13■□□□□ 0.81
Clcn1Q64347 Gm8330-201ENSMUST00000182754 1008 ntBASIC20.13■□□□□ 0.81
Clcn1Q64347 Gm4575-201ENSMUST00000182991 1002 ntBASIC20.13■□□□□ 0.81
Clcn1Q64347 Gm8709-201ENSMUST00000183230 1012 ntBASIC20.13■□□□□ 0.81
Clcn1Q64347 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC20.13■□□□□ 0.81
Clcn1Q64347 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcn1Q64347 Gm45167-201ENSMUST00000208007 322 ntBASIC20.13■□□□□ 0.81
Clcn1Q64347 AC069562.2-201ENSMUST00000224644 2146 ntBASIC20.13■□□□□ 0.81
Clcn1Q64347 AC117588.1-201ENSMUST00000228510 999 ntBASIC20.13■□□□□ 0.81
Clcn1Q64347 Gm10293-201ENSMUST00000076317 1002 ntBASIC20.13■□□□□ 0.81
Clcn1Q64347 Gm6316-201ENSMUST00000082064 1020 ntBASIC20.13■□□□□ 0.81
Clcn1Q64347 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcn1Q64347 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcn1Q64347 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcn1Q64347 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcn1Q64347 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcn1Q64347 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcn1Q64347 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn1Q64347 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Clcn1Q64347 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn1Q64347 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn1Q64347 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn1Q64347 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn1Q64347 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn1Q64347 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn1Q64347 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn1Q64347 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC20.12■□□□□ 0.81
Clcn1Q64347 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn1Q64347 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC20.12■□□□□ 0.81
Clcn1Q64347 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC20.12■□□□□ 0.81
Clcn1Q64347 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Clcn1Q64347 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn1Q64347 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Clcn1Q64347 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn1Q64347 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn1Q64347 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn1Q64347 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn1Q64347 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Clcn1Q64347 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
Clcn1Q64347 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Clcn1Q64347 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcn1Q64347 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcn1Q64347 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Clcn1Q64347 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcn1Q64347 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcn1Q64347 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Clcn1Q64347 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcn1Q64347 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC20.11■□□□□ 0.81
Clcn1Q64347 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcn1Q64347 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Clcn1Q64347 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcn1Q64347 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC20.11■□□□□ 0.81
Clcn1Q64347 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Clcn1Q64347 Gm7229-201ENSMUST00000214719 1007 ntBASIC20.11■□□□□ 0.81
Clcn1Q64347 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC20.11■□□□□ 0.81
Clcn1Q64347 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcn1Q64347 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcn1Q64347 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcn1Q64347 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcn1Q64347 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcn1Q64347 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcn1Q64347 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Clcn1Q64347 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Clcn1Q64347 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcn1Q64347 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcn1Q64347 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms