Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim27Q62158 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim27Q62158 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim27Q62158 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim27Q62158 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim27Q62158 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Trim27Q62158 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim27Q62158 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.61■□□□□ 0.73
Trim27Q62158 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim27Q62158 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.61■□□□□ 0.73
Trim27Q62158 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.61■□□□□ 0.73
Trim27Q62158 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.61■□□□□ 0.73
Trim27Q62158 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim27Q62158 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim27Q62158 Gm44616-201ENSMUST00000206417 1732 ntBASIC19.61■□□□□ 0.73
Trim27Q62158 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim27Q62158 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim27Q62158 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim27Q62158 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim27Q62158 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.61■□□□□ 0.73
Trim27Q62158 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC19.6■□□□□ 0.73
Trim27Q62158 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
Trim27Q62158 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Trim27Q62158 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim27Q62158 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim27Q62158 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim27Q62158 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim27Q62158 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trim27Q62158 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Trim27Q62158 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim27Q62158 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.6■□□□□ 0.73
Trim27Q62158 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim27Q62158 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim27Q62158 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim27Q62158 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim27Q62158 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim27Q62158 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim27Q62158 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Trim27Q62158 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim27Q62158 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim27Q62158 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim27Q62158 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim27Q62158 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim27Q62158 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim27Q62158 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim27Q62158 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim27Q62158 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim27Q62158 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim27Q62158 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
Trim27Q62158 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim27Q62158 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim27Q62158 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim27Q62158 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim27Q62158 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC19.59■□□□□ 0.73
Trim27Q62158 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim27Q62158 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim27Q62158 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim27Q62158 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim27Q62158 Gm14859-201ENSMUST00000117752 357 ntBASIC19.59■□□□□ 0.73
Trim27Q62158 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.59■□□□□ 0.73
Trim27Q62158 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.59■□□□□ 0.73
Trim27Q62158 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim27Q62158 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim27Q62158 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim27Q62158 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim27Q62158 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim27Q62158 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim27Q62158 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim27Q62158 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.58■□□□□ 0.73
Trim27Q62158 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trim27Q62158 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Trim27Q62158 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim27Q62158 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Trim27Q62158 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim27Q62158 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim27Q62158 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Trim27Q62158 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim27Q62158 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Trim27Q62158 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim27Q62158 Gm27867-201ENSMUST00000184778 125 ntBASIC19.58■□□□□ 0.72
Trim27Q62158 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim27Q62158 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim27Q62158 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim27Q62158 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim27Q62158 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim27Q62158 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim27Q62158 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim27Q62158 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim27Q62158 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim27Q62158 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim27Q62158 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim27Q62158 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.57■□□□□ 0.72
Trim27Q62158 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim27Q62158 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim27Q62158 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim27Q62158 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim27Q62158 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Trim27Q62158 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim27Q62158 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim27Q62158 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms