Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SspnQ62147 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SspnQ62147 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SspnQ62147 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SspnQ62147 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SspnQ62147 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SspnQ62147 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SspnQ62147 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SspnQ62147 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SspnQ62147 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
SspnQ62147 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SspnQ62147 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SspnQ62147 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.38□□□□□ -0.27
SspnQ62147 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SspnQ62147 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
SspnQ62147 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SspnQ62147 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SspnQ62147 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SspnQ62147 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SspnQ62147 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
SspnQ62147 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SspnQ62147 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SspnQ62147 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SspnQ62147 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SspnQ62147 Prob1-201ENSMUST00000097619 3021 ntBASIC13.38□□□□□ -0.27
SspnQ62147 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.38□□□□□ -0.27
SspnQ62147 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SspnQ62147 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SspnQ62147 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SspnQ62147 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SspnQ62147 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SspnQ62147 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SspnQ62147 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SspnQ62147 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SspnQ62147 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SspnQ62147 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SspnQ62147 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SspnQ62147 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SspnQ62147 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SspnQ62147 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SspnQ62147 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SspnQ62147 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SspnQ62147 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SspnQ62147 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
SspnQ62147 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.37□□□□□ -0.27
SspnQ62147 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SspnQ62147 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.37□□□□□ -0.27
SspnQ62147 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SspnQ62147 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
SspnQ62147 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SspnQ62147 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.37□□□□□ -0.27
SspnQ62147 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SspnQ62147 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.37□□□□□ -0.27
SspnQ62147 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SspnQ62147 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SspnQ62147 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SspnQ62147 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
SspnQ62147 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SspnQ62147 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SspnQ62147 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SspnQ62147 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SspnQ62147 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.37□□□□□ -0.27
SspnQ62147 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SspnQ62147 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
SspnQ62147 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SspnQ62147 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SspnQ62147 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SspnQ62147 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SspnQ62147 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SspnQ62147 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SspnQ62147 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SspnQ62147 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SspnQ62147 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SspnQ62147 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SspnQ62147 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SspnQ62147 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SspnQ62147 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SspnQ62147 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SspnQ62147 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SspnQ62147 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SspnQ62147 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SspnQ62147 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.36□□□□□ -0.27
SspnQ62147 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SspnQ62147 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SspnQ62147 Gm22697-201ENSMUST00000175194 63 ntBASIC13.36□□□□□ -0.27
SspnQ62147 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.36□□□□□ -0.27
SspnQ62147 Gm18101-201ENSMUST00000215769 548 ntBASIC13.36□□□□□ -0.27
SspnQ62147 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.36□□□□□ -0.27
SspnQ62147 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SspnQ62147 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SspnQ62147 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SspnQ62147 Dancr-204ENSMUST00000132389 2347 ntBASIC13.36□□□□□ -0.27
SspnQ62147 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SspnQ62147 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SspnQ62147 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SspnQ62147 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.36□□□□□ -0.27
SspnQ62147 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SspnQ62147 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SspnQ62147 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SspnQ62147 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms