Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctr9Q62018 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ctr9Q62018 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctr9Q62018 Haglr-201ENSMUST00000100000 2085 ntBASIC18.78■□□□□ 0.6
Ctr9Q62018 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctr9Q62018 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.78■□□□□ 0.6
Ctr9Q62018 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctr9Q62018 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ctr9Q62018 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ctr9Q62018 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ctr9Q62018 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ctr9Q62018 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ctr9Q62018 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Ctr9Q62018 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ctr9Q62018 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ctr9Q62018 Gm8097-201ENSMUST00000117903 829 ntBASIC18.77■□□□□ 0.6
Ctr9Q62018 Gm13418-201ENSMUST00000119097 944 ntBASIC18.77■□□□□ 0.6
Ctr9Q62018 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.77■□□□□ 0.6
Ctr9Q62018 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Ctr9Q62018 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.77■□□□□ 0.6
Ctr9Q62018 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ctr9Q62018 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Ctr9Q62018 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ctr9Q62018 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ctr9Q62018 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ctr9Q62018 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Ctr9Q62018 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctr9Q62018 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctr9Q62018 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctr9Q62018 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ctr9Q62018 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctr9Q62018 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ctr9Q62018 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctr9Q62018 Dancr-204ENSMUST00000132389 2347 ntBASIC18.76■□□□□ 0.59
Ctr9Q62018 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctr9Q62018 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.76■□□□□ 0.59
Ctr9Q62018 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Ctr9Q62018 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.76■□□□□ 0.59
Ctr9Q62018 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ctr9Q62018 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.76■□□□□ 0.59
Ctr9Q62018 Gm4535-201ENSMUST00000182274 558 ntBASIC18.76■□□□□ 0.59
Ctr9Q62018 Gm8655-201ENSMUST00000221159 852 ntBASIC18.76■□□□□ 0.59
Ctr9Q62018 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctr9Q62018 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctr9Q62018 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctr9Q62018 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ctr9Q62018 Gm10355-201ENSMUST00000097146 517 ntBASIC18.76■□□□□ 0.59
Ctr9Q62018 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctr9Q62018 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctr9Q62018 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctr9Q62018 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctr9Q62018 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctr9Q62018 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ctr9Q62018 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctr9Q62018 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctr9Q62018 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctr9Q62018 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctr9Q62018 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctr9Q62018 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ctr9Q62018 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ctr9Q62018 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ctr9Q62018 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ctr9Q62018 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ctr9Q62018 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ctr9Q62018 Gm11780-201ENSMUST00000136880 516 ntBASIC18.75■□□□□ 0.59
Ctr9Q62018 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.75■□□□□ 0.59
Ctr9Q62018 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.75■□□□□ 0.59
Ctr9Q62018 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.75■□□□□ 0.59
Ctr9Q62018 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.75■□□□□ 0.59
Ctr9Q62018 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ctr9Q62018 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ctr9Q62018 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ctr9Q62018 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ctr9Q62018 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ctr9Q62018 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ctr9Q62018 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ctr9Q62018 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ctr9Q62018 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ctr9Q62018 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ctr9Q62018 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ctr9Q62018 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Ctr9Q62018 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.74■□□□□ 0.59
Ctr9Q62018 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ctr9Q62018 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ctr9Q62018 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ctr9Q62018 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ctr9Q62018 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.74■□□□□ 0.59
Ctr9Q62018 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.74■□□□□ 0.59
Ctr9Q62018 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ctr9Q62018 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.74■□□□□ 0.59
Ctr9Q62018 Gm18195-201ENSMUST00000207604 706 ntBASIC18.74■□□□□ 0.59
Ctr9Q62018 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ctr9Q62018 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ctr9Q62018 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ctr9Q62018 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ctr9Q62018 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ctr9Q62018 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ctr9Q62018 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ctr9Q62018 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ctr9Q62018 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms