Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sox17Q61473 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sox17Q61473 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.04■□□□□ -0
Sox17Q61473 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.04■□□□□ -0
Sox17Q61473 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Sox17Q61473 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Sox17Q61473 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox17Q61473 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Sox17Q61473 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Sox17Q61473 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.03■□□□□ -0
Sox17Q61473 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sox17Q61473 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox17Q61473 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Sox17Q61473 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Sox17Q61473 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox17Q61473 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox17Q61473 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox17Q61473 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox17Q61473 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sox17Q61473 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sox17Q61473 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Sox17Q61473 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Sox17Q61473 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox17Q61473 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Sox17Q61473 Gm12527-201ENSMUST00000117967 564 ntBASIC15.03■□□□□ -0
Sox17Q61473 Gm15378-201ENSMUST00000121894 207 ntBASIC15.03■□□□□ -0
Sox17Q61473 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.03■□□□□ -0
Sox17Q61473 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sox17Q61473 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox17Q61473 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox17Q61473 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Sox17Q61473 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Sox17Q61473 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox17Q61473 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox17Q61473 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Sox17Q61473 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
Sox17Q61473 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sox17Q61473 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Sox17Q61473 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Sox17Q61473 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Sox17Q61473 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Sox17Q61473 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Sox17Q61473 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Sox17Q61473 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.02■□□□□ -0
Sox17Q61473 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Sox17Q61473 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Sox17Q61473 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox17Q61473 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox17Q61473 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sox17Q61473 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.02■□□□□ -0
Sox17Q61473 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Sox17Q61473 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox17Q61473 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox17Q61473 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox17Q61473 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sox17Q61473 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Sox17Q61473 Gm5643-201ENSMUST00000117081 966 ntBASIC15.02■□□□□ -0
Sox17Q61473 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.02■□□□□ -0
Sox17Q61473 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.02■□□□□ -0
Sox17Q61473 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.02■□□□□ -0
Sox17Q61473 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.02■□□□□ -0
Sox17Q61473 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Sox17Q61473 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox17Q61473 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox17Q61473 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox17Q61473 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Sox17Q61473 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Sox17Q61473 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.02□□□□□ -0.01
Sox17Q61473 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Sox17Q61473 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox17Q61473 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox17Q61473 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox17Q61473 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox17Q61473 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox17Q61473 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Sox17Q61473 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox17Q61473 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox17Q61473 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox17Q61473 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.01□□□□□ -0.01
Sox17Q61473 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox17Q61473 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox17Q61473 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox17Q61473 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sox17Q61473 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.01□□□□□ -0.01
Sox17Q61473 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox17Q61473 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox17Q61473 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox17Q61473 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.01□□□□□ -0.01
Sox17Q61473 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox17Q61473 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox17Q61473 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox17Q61473 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox17Q61473 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox17Q61473 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sox17Q61473 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Sox17Q61473 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sox17Q61473 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Sox17Q61473 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sox17Q61473 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox17Q61473 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms