Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.11■□□□□ 0.17
Six4Q61321 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Six4Q61321 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Six4Q61321 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Six4Q61321 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Six4Q61321 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Six4Q61321 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.11■□□□□ 0.17
Six4Q61321 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Six4Q61321 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Six4Q61321 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Six4Q61321 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Six4Q61321 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six4Q61321 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Six4Q61321 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six4Q61321 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six4Q61321 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six4Q61321 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six4Q61321 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six4Q61321 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six4Q61321 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six4Q61321 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Six4Q61321 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.1■□□□□ 0.17
Six4Q61321 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six4Q61321 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six4Q61321 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six4Q61321 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six4Q61321 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six4Q61321 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six4Q61321 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.1■□□□□ 0.17
Six4Q61321 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Six4Q61321 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Six4Q61321 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Six4Q61321 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Six4Q61321 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six4Q61321 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six4Q61321 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Six4Q61321 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six4Q61321 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six4Q61321 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six4Q61321 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Six4Q61321 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six4Q61321 Dancr-204ENSMUST00000132389 2347 ntBASIC16.1■□□□□ 0.17
Six4Q61321 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Six4Q61321 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Six4Q61321 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Six4Q61321 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Six4Q61321 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Six4Q61321 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Six4Q61321 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Six4Q61321 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Six4Q61321 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Six4Q61321 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Six4Q61321 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Six4Q61321 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Six4Q61321 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.09■□□□□ 0.17
Six4Q61321 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Six4Q61321 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Six4Q61321 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Six4Q61321 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Six4Q61321 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Six4Q61321 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Six4Q61321 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Six4Q61321 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.09■□□□□ 0.17
Six4Q61321 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Six4Q61321 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Six4Q61321 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Six4Q61321 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.08■□□□□ 0.17
Six4Q61321 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Six4Q61321 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
Six4Q61321 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Six4Q61321 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Six4Q61321 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Six4Q61321 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Six4Q61321 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Six4Q61321 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Six4Q61321 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Six4Q61321 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.08■□□□□ 0.16
Six4Q61321 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.08■□□□□ 0.16
Six4Q61321 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Six4Q61321 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.08■□□□□ 0.16
Six4Q61321 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Six4Q61321 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Six4Q61321 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Six4Q61321 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.08■□□□□ 0.16
Six4Q61321 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Six4Q61321 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Six4Q61321 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Six4Q61321 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Six4Q61321 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Six4Q61321 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Six4Q61321 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Six4Q61321 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.07■□□□□ 0.16
Six4Q61321 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Six4Q61321 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Six4Q61321 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Six4Q61321 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.07■□□□□ 0.16
Six4Q61321 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.07■□□□□ 0.16
Six4Q61321 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Six4Q61321 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Six4Q61321 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms