Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col11a1Q61245 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col11a1Q61245 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Col11a1Q61245 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col11a1Q61245 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.77■□□□□ 0.43
Col11a1Q61245 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col11a1Q61245 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.77■□□□□ 0.43
Col11a1Q61245 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col11a1Q61245 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Col11a1Q61245 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.77■□□□□ 0.43
Col11a1Q61245 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col11a1Q61245 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col11a1Q61245 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col11a1Q61245 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col11a1Q61245 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.76■□□□□ 0.43
Col11a1Q61245 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col11a1Q61245 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Col11a1Q61245 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Col11a1Q61245 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC17.76■□□□□ 0.43
Col11a1Q61245 Gm24158-201ENSMUST00000175263 71 ntBASIC17.76■□□□□ 0.43
Col11a1Q61245 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.76■□□□□ 0.43
Col11a1Q61245 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col11a1Q61245 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.76■□□□□ 0.43
Col11a1Q61245 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col11a1Q61245 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col11a1Q61245 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col11a1Q61245 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col11a1Q61245 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col11a1Q61245 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.76■□□□□ 0.43
Col11a1Q61245 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col11a1Q61245 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col11a1Q61245 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col11a1Q61245 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.75■□□□□ 0.43
Col11a1Q61245 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col11a1Q61245 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col11a1Q61245 Gm13823-201ENSMUST00000119930 345 ntBASIC17.75■□□□□ 0.43
Col11a1Q61245 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.75■□□□□ 0.43
Col11a1Q61245 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.75■□□□□ 0.43
Col11a1Q61245 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col11a1Q61245 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col11a1Q61245 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col11a1Q61245 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.75■□□□□ 0.43
Col11a1Q61245 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col11a1Q61245 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Col11a1Q61245 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.75■□□□□ 0.43
Col11a1Q61245 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col11a1Q61245 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col11a1Q61245 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col11a1Q61245 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Col11a1Q61245 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col11a1Q61245 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
Col11a1Q61245 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col11a1Q61245 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col11a1Q61245 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Col11a1Q61245 Gm18057-201ENSMUST00000208220 503 ntBASIC17.75■□□□□ 0.43
Col11a1Q61245 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col11a1Q61245 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col11a1Q61245 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Col11a1Q61245 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Col11a1Q61245 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.74■□□□□ 0.43
Col11a1Q61245 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col11a1Q61245 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.74■□□□□ 0.43
Col11a1Q61245 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Col11a1Q61245 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Col11a1Q61245 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Col11a1Q61245 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Col11a1Q61245 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Col11a1Q61245 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col11a1Q61245 Gtpbp10-211ENSMUST00000198799 648 ntBASIC17.74■□□□□ 0.43
Col11a1Q61245 Gm7730-201ENSMUST00000212486 454 ntBASIC17.74■□□□□ 0.43
Col11a1Q61245 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.74■□□□□ 0.43
Col11a1Q61245 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col11a1Q61245 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col11a1Q61245 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col11a1Q61245 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col11a1Q61245 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Col11a1Q61245 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col11a1Q61245 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Col11a1Q61245 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.73■□□□□ 0.43
Col11a1Q61245 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.73■□□□□ 0.43
Col11a1Q61245 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.73■□□□□ 0.43
Col11a1Q61245 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col11a1Q61245 Mir7684-201ENSMUST00000183858 60 ntBASIC17.73■□□□□ 0.43
Col11a1Q61245 Gm17837-201ENSMUST00000186435 985 ntBASIC17.73■□□□□ 0.43
Col11a1Q61245 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.73■□□□□ 0.43
Col11a1Q61245 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col11a1Q61245 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col11a1Q61245 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col11a1Q61245 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col11a1Q61245 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.72■□□□□ 0.43
Col11a1Q61245 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.72■□□□□ 0.43
Col11a1Q61245 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col11a1Q61245 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.72■□□□□ 0.43
Col11a1Q61245 Gm27430-201ENSMUST00000184585 107 ntBASIC17.72■□□□□ 0.43
Col11a1Q61245 Gm29541-201ENSMUST00000191351 678 ntBASIC17.72■□□□□ 0.43
Col11a1Q61245 Gm44333-201ENSMUST00000197168 107 ntBASIC17.72■□□□□ 0.43
Col11a1Q61245 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col11a1Q61245 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Col11a1Q61245 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC17.72■□□□□ 0.43
Col11a1Q61245 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms