Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cln3Q61124 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cln3Q61124 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.44■□□□□ 0.38
Cln3Q61124 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.44■□□□□ 0.38
Cln3Q61124 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cln3Q61124 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cln3Q61124 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cln3Q61124 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cln3Q61124 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cln3Q61124 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cln3Q61124 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Cln3Q61124 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cln3Q61124 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.44■□□□□ 0.38
Cln3Q61124 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.44■□□□□ 0.38
Cln3Q61124 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Cln3Q61124 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cln3Q61124 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cln3Q61124 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cln3Q61124 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cln3Q61124 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cln3Q61124 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cln3Q61124 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Cln3Q61124 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cln3Q61124 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cln3Q61124 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cln3Q61124 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.43■□□□□ 0.38
Cln3Q61124 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cln3Q61124 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cln3Q61124 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cln3Q61124 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Cln3Q61124 Gm14701-201ENSMUST00000117156 348 ntBASIC17.43■□□□□ 0.38
Cln3Q61124 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Cln3Q61124 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.43■□□□□ 0.38
Cln3Q61124 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cln3Q61124 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cln3Q61124 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cln3Q61124 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cln3Q61124 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cln3Q61124 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cln3Q61124 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cln3Q61124 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cln3Q61124 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cln3Q61124 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cln3Q61124 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cln3Q61124 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cln3Q61124 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cln3Q61124 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cln3Q61124 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cln3Q61124 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cln3Q61124 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cln3Q61124 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cln3Q61124 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.42■□□□□ 0.38
Cln3Q61124 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cln3Q61124 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cln3Q61124 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.42■□□□□ 0.38
Cln3Q61124 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Cln3Q61124 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cln3Q61124 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.42■□□□□ 0.38
Cln3Q61124 Gm45747-201ENSMUST00000212203 999 ntBASIC17.42■□□□□ 0.38
Cln3Q61124 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cln3Q61124 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cln3Q61124 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cln3Q61124 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cln3Q61124 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cln3Q61124 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cln3Q61124 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cln3Q61124 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cln3Q61124 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cln3Q61124 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cln3Q61124 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Cln3Q61124 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cln3Q61124 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cln3Q61124 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cln3Q61124 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cln3Q61124 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cln3Q61124 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cln3Q61124 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cln3Q61124 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cln3Q61124 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cln3Q61124 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cln3Q61124 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.41■□□□□ 0.38
Cln3Q61124 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cln3Q61124 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.41■□□□□ 0.38
Cln3Q61124 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.41■□□□□ 0.38
Cln3Q61124 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cln3Q61124 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Cln3Q61124 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.41■□□□□ 0.38
Cln3Q61124 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cln3Q61124 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.41■□□□□ 0.38
Cln3Q61124 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.41■□□□□ 0.38
Cln3Q61124 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cln3Q61124 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cln3Q61124 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cln3Q61124 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cln3Q61124 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cln3Q61124 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cln3Q61124 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cln3Q61124 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cln3Q61124 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.4■□□□□ 0.38
Cln3Q61124 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms