Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nr1h4Q60641 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nr1h4Q60641 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nr1h4Q60641 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nr1h4Q60641 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nr1h4Q60641 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nr1h4Q60641 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nr1h4Q60641 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.23■□□□□ 0.03
Nr1h4Q60641 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nr1h4Q60641 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Nr1h4Q60641 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nr1h4Q60641 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nr1h4Q60641 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nr1h4Q60641 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nr1h4Q60641 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nr1h4Q60641 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.23■□□□□ 0.03
Nr1h4Q60641 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nr1h4Q60641 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nr1h4Q60641 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nr1h4Q60641 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nr1h4Q60641 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nr1h4Q60641 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nr1h4Q60641 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nr1h4Q60641 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nr1h4Q60641 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nr1h4Q60641 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nr1h4Q60641 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nr1h4Q60641 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Nr1h4Q60641 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.22■□□□□ 0.03
Nr1h4Q60641 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.22■□□□□ 0.03
Nr1h4Q60641 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.22■□□□□ 0.03
Nr1h4Q60641 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.22■□□□□ 0.03
Nr1h4Q60641 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nr1h4Q60641 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.22■□□□□ 0.03
Nr1h4Q60641 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nr1h4Q60641 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nr1h4Q60641 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nr1h4Q60641 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nr1h4Q60641 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Nr1h4Q60641 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nr1h4Q60641 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.22■□□□□ 0.03
Nr1h4Q60641 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nr1h4Q60641 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.21■□□□□ 0.03
Nr1h4Q60641 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nr1h4Q60641 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nr1h4Q60641 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.21■□□□□ 0.03
Nr1h4Q60641 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nr1h4Q60641 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nr1h4Q60641 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.21■□□□□ 0.03
Nr1h4Q60641 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nr1h4Q60641 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Nr1h4Q60641 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nr1h4Q60641 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Nr1h4Q60641 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nr1h4Q60641 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Nr1h4Q60641 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nr1h4Q60641 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Nr1h4Q60641 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nr1h4Q60641 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nr1h4Q60641 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nr1h4Q60641 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.21■□□□□ 0.03
Nr1h4Q60641 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.21■□□□□ 0.03
Nr1h4Q60641 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nr1h4Q60641 Mir5122-201ENSMUST00000175004 89 ntBASIC15.21■□□□□ 0.03
Nr1h4Q60641 Gm7370-201ENSMUST00000219471 767 ntBASIC15.21■□□□□ 0.03
Nr1h4Q60641 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nr1h4Q60641 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nr1h4Q60641 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nr1h4Q60641 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nr1h4Q60641 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nr1h4Q60641 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Nr1h4Q60641 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nr1h4Q60641 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nr1h4Q60641 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nr1h4Q60641 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nr1h4Q60641 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nr1h4Q60641 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Nr1h4Q60641 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nr1h4Q60641 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nr1h4Q60641 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Nr1h4Q60641 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nr1h4Q60641 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nr1h4Q60641 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nr1h4Q60641 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Nr1h4Q60641 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nr1h4Q60641 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Nr1h4Q60641 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Nr1h4Q60641 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nr1h4Q60641 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Nr1h4Q60641 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Nr1h4Q60641 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nr1h4Q60641 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nr1h4Q60641 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nr1h4Q60641 Asic1-205ENSMUST00000228185 1818 ntBASIC15.2■□□□□ 0.02
Nr1h4Q60641 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.2■□□□□ 0.02
Nr1h4Q60641 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nr1h4Q60641 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nr1h4Q60641 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nr1h4Q60641 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nr1h4Q60641 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms