Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav2Q5R1I9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav2Q5R1I9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav2Q5R1I9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav2Q5R1I9 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav2Q5R1I9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav2Q5R1I9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Gm25406-201ENSMUST00000157599 105 ntBASIC12.73□□□□□ -0.37
Trav2Q5R1I9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Gm18733-201ENSMUST00000173950 856 ntBASIC12.73□□□□□ -0.37
Trav2Q5R1I9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.73□□□□□ -0.37
Trav2Q5R1I9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav2Q5R1I9 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.72□□□□□ -0.37
Trav2Q5R1I9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav2Q5R1I9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav2Q5R1I9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav2Q5R1I9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav2Q5R1I9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav2Q5R1I9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav2Q5R1I9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav2Q5R1I9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav2Q5R1I9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav2Q5R1I9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav2Q5R1I9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav2Q5R1I9 Mir6404-201ENSMUST00000183699 94 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms