Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-4Q5R1H9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-4Q5R1H9 BC037039-201ENSMUST00000192003 2205 ntBASIC12.23□□□□□ -0.45
Trav7d-4Q5R1H9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-4Q5R1H9 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav7d-4Q5R1H9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-4Q5R1H9 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-4Q5R1H9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-4Q5R1H9 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-4Q5R1H9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-4Q5R1H9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-4Q5R1H9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-4Q5R1H9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav7d-4Q5R1H9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-4Q5R1H9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.23□□□□□ -0.45
Trav7d-4Q5R1H9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-4Q5R1H9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-4Q5R1H9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-4Q5R1H9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-4Q5R1H9 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-4Q5R1H9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-4Q5R1H9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-4Q5R1H9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav7d-4Q5R1H9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-4Q5R1H9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-4Q5R1H9 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav7d-4Q5R1H9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav7d-4Q5R1H9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7d-4Q5R1H9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7d-4Q5R1H9 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7d-4Q5R1H9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav7d-4Q5R1H9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7d-4Q5R1H9 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7d-4Q5R1H9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7d-4Q5R1H9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7d-4Q5R1H9 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7d-4Q5R1H9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.21□□□□□ -0.45
Trav7d-4Q5R1H9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7d-4Q5R1H9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav7d-4Q5R1H9 Gm26524-201ENSMUST00000192339 390 ntBASIC12.21□□□□□ -0.45
Trav7d-4Q5R1H9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7d-4Q5R1H9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7d-4Q5R1H9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7d-4Q5R1H9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav7d-4Q5R1H9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7d-4Q5R1H9 Gm10493-201ENSMUST00000097270 612 ntBASIC12.21□□□□□ -0.45
Trav7d-4Q5R1H9 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav7d-4Q5R1H9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7d-4Q5R1H9 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7d-4Q5R1H9 Phf7-203ENSMUST00000226565 1971 ntBASIC12.21□□□□□ -0.46
Trav7d-4Q5R1H9 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7d-4Q5R1H9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7d-4Q5R1H9 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7d-4Q5R1H9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav7d-4Q5R1H9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.21□□□□□ -0.46
Trav7d-4Q5R1H9 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav7d-4Q5R1H9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms