Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Gm10602-201ENSMUST00000098239 609 ntBASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.46□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Gm36967-201ENSMUST00000193814 266 ntBASIC12.46□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Gm18115-201ENSMUST00000221209 621 ntBASIC12.46□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.46□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.46□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.46□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Gm7791-201ENSMUST00000219066 539 ntBASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Gm20049-201ENSMUST00000219950 730 ntBASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.44□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav15-1-dv6-1Q5R1D2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms