Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps13aQ5H8C4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps13aQ5H8C4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Vps13aQ5H8C4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps13aQ5H8C4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps13aQ5H8C4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 Gm9682-201ENSMUST00000197505 556 ntBASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 Gm9794-201ENSMUST00000202370 423 ntBASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 Gm18622-201ENSMUST00000219361 595 ntBASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 Gm27989-201ENSMUST00000184721 107 ntBASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 Gm44855-201ENSMUST00000205725 362 ntBASIC15.73■□□□□ 0.11
Vps13aQ5H8C4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps13aQ5H8C4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Vps13aQ5H8C4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps13aQ5H8C4 Gm44719-201ENSMUST00000206404 149 ntBASIC15.72■□□□□ 0.11
Vps13aQ5H8C4 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.72■□□□□ 0.11
Vps13aQ5H8C4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps13aQ5H8C4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps13aQ5H8C4 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.72■□□□□ 0.11
Vps13aQ5H8C4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.72■□□□□ 0.11
Vps13aQ5H8C4 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps13aQ5H8C4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps13aQ5H8C4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.72■□□□□ 0.11
Vps13aQ5H8C4 Gm8344-201ENSMUST00000119813 856 ntBASIC15.72■□□□□ 0.11
Vps13aQ5H8C4 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps13aQ5H8C4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps13aQ5H8C4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps13aQ5H8C4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps13aQ5H8C4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps13aQ5H8C4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps13aQ5H8C4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Vps13aQ5H8C4 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Vps13aQ5H8C4 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Vps13aQ5H8C4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps13aQ5H8C4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.71■□□□□ 0.11
Vps13aQ5H8C4 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps13aQ5H8C4 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps13aQ5H8C4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps13aQ5H8C4 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.71■□□□□ 0.11
Vps13aQ5H8C4 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps13aQ5H8C4 Gm13829-201ENSMUST00000119600 138 ntBASIC15.71■□□□□ 0.11
Vps13aQ5H8C4 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.71■□□□□ 0.11
Vps13aQ5H8C4 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps13aQ5H8C4 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps13aQ5H8C4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps13aQ5H8C4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps13aQ5H8C4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Vps13aQ5H8C4 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Vps13aQ5H8C4 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.71■□□□□ 0.1
Vps13aQ5H8C4 Mir7684-201ENSMUST00000183858 60 ntBASIC15.71■□□□□ 0.1
Vps13aQ5H8C4 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Vps13aQ5H8C4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps13aQ5H8C4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps13aQ5H8C4 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps13aQ5H8C4 Gm17837-201ENSMUST00000186435 985 ntBASIC15.7■□□□□ 0.1
Vps13aQ5H8C4 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps13aQ5H8C4 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps13aQ5H8C4 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Vps13aQ5H8C4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps13aQ5H8C4 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps13aQ5H8C4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps13aQ5H8C4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps13aQ5H8C4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Vps13aQ5H8C4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps13aQ5H8C4 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.7■□□□□ 0.1
Vps13aQ5H8C4 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.7■□□□□ 0.1
Vps13aQ5H8C4 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
Vps13aQ5H8C4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps13aQ5H8C4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Vps13aQ5H8C4 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps13aQ5H8C4 Gm7774-201ENSMUST00000200064 533 ntBASIC15.69■□□□□ 0.1
Vps13aQ5H8C4 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps13aQ5H8C4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps13aQ5H8C4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps13aQ5H8C4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Vps13aQ5H8C4 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms