Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf38aQ4FK66 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf38aQ4FK66 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf38aQ4FK66 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf38aQ4FK66 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf38aQ4FK66 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.6■□□□□ 0.57
Prpf38aQ4FK66 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.6■□□□□ 0.57
Prpf38aQ4FK66 Gm27646-201ENSMUST00000183989 110 ntBASIC18.6■□□□□ 0.57
Prpf38aQ4FK66 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf38aQ4FK66 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf38aQ4FK66 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf38aQ4FK66 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf38aQ4FK66 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.6■□□□□ 0.57
Prpf38aQ4FK66 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prpf38aQ4FK66 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Prpf38aQ4FK66 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf38aQ4FK66 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.59■□□□□ 0.57
Prpf38aQ4FK66 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf38aQ4FK66 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf38aQ4FK66 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf38aQ4FK66 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf38aQ4FK66 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf38aQ4FK66 Gm13036-201ENSMUST00000117799 748 ntBASIC18.59■□□□□ 0.57
Prpf38aQ4FK66 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.59■□□□□ 0.57
Prpf38aQ4FK66 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf38aQ4FK66 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.59■□□□□ 0.57
Prpf38aQ4FK66 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.59■□□□□ 0.57
Prpf38aQ4FK66 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Prpf38aQ4FK66 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf38aQ4FK66 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf38aQ4FK66 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Prpf38aQ4FK66 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf38aQ4FK66 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Prpf38aQ4FK66 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Prpf38aQ4FK66 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Prpf38aQ4FK66 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf38aQ4FK66 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf38aQ4FK66 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf38aQ4FK66 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Prpf38aQ4FK66 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf38aQ4FK66 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prpf38aQ4FK66 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Prpf38aQ4FK66 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Prpf38aQ4FK66 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.58■□□□□ 0.57
Prpf38aQ4FK66 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Prpf38aQ4FK66 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf38aQ4FK66 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Prpf38aQ4FK66 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf38aQ4FK66 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.58■□□□□ 0.56
Prpf38aQ4FK66 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Prpf38aQ4FK66 Gm6257-201ENSMUST00000163864 910 ntBASIC18.58■□□□□ 0.56
Prpf38aQ4FK66 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf38aQ4FK66 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.58■□□□□ 0.56
Prpf38aQ4FK66 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.58■□□□□ 0.56
Prpf38aQ4FK66 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.58■□□□□ 0.56
Prpf38aQ4FK66 Psmb5-202ENSMUST00000227257 622 ntBASIC18.58■□□□□ 0.56
Prpf38aQ4FK66 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf38aQ4FK66 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf38aQ4FK66 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Prpf38aQ4FK66 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.58■□□□□ 0.56
Prpf38aQ4FK66 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf38aQ4FK66 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf38aQ4FK66 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prpf38aQ4FK66 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.58■□□□□ 0.56
Prpf38aQ4FK66 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf38aQ4FK66 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf38aQ4FK66 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf38aQ4FK66 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Prpf38aQ4FK66 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf38aQ4FK66 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.57■□□□□ 0.56
Prpf38aQ4FK66 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf38aQ4FK66 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf38aQ4FK66 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf38aQ4FK66 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf38aQ4FK66 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Prpf38aQ4FK66 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Prpf38aQ4FK66 Gm27628-201ENSMUST00000184911 107 ntBASIC18.57■□□□□ 0.56
Prpf38aQ4FK66 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.57■□□□□ 0.56
Prpf38aQ4FK66 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf38aQ4FK66 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf38aQ4FK66 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf38aQ4FK66 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf38aQ4FK66 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf38aQ4FK66 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf38aQ4FK66 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf38aQ4FK66 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf38aQ4FK66 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf38aQ4FK66 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Prpf38aQ4FK66 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf38aQ4FK66 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.56■□□□□ 0.56
Prpf38aQ4FK66 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf38aQ4FK66 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf38aQ4FK66 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf38aQ4FK66 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Prpf38aQ4FK66 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.56■□□□□ 0.56
Prpf38aQ4FK66 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.56■□□□□ 0.56
Prpf38aQ4FK66 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.56■□□□□ 0.56
Prpf38aQ4FK66 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf38aQ4FK66 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf38aQ4FK66 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms