Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Shank3Q4ACU6 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC19.76■□□□□ 0.75
Shank3Q4ACU6 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC19.76■□□□□ 0.75
Shank3Q4ACU6 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shank3Q4ACU6 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.75■□□□□ 0.75
Shank3Q4ACU6 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shank3Q4ACU6 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shank3Q4ACU6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shank3Q4ACU6 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shank3Q4ACU6 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC19.75■□□□□ 0.75
Shank3Q4ACU6 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Shank3Q4ACU6 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC19.75■□□□□ 0.75
Shank3Q4ACU6 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Shank3Q4ACU6 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Shank3Q4ACU6 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shank3Q4ACU6 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC19.75■□□□□ 0.75
Shank3Q4ACU6 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC19.75■□□□□ 0.75
Shank3Q4ACU6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Shank3Q4ACU6 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Shank3Q4ACU6 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shank3Q4ACU6 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shank3Q4ACU6 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shank3Q4ACU6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shank3Q4ACU6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shank3Q4ACU6 Gm25287-201ENSMUST00000103846 110 ntBASIC19.74■□□□□ 0.75
Shank3Q4ACU6 Gm22918-201ENSMUST00000103855 110 ntBASIC19.74■□□□□ 0.75
Shank3Q4ACU6 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shank3Q4ACU6 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shank3Q4ACU6 Gm7286-201ENSMUST00000182691 1007 ntBASIC19.74■□□□□ 0.75
Shank3Q4ACU6 CT025555.1-201ENSMUST00000225901 1217 ntBASIC19.74■□□□□ 0.75
Shank3Q4ACU6 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shank3Q4ACU6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shank3Q4ACU6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shank3Q4ACU6 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shank3Q4ACU6 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shank3Q4ACU6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shank3Q4ACU6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shank3Q4ACU6 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shank3Q4ACU6 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shank3Q4ACU6 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shank3Q4ACU6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Shank3Q4ACU6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shank3Q4ACU6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shank3Q4ACU6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.73■□□□□ 0.75
Shank3Q4ACU6 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Shank3Q4ACU6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shank3Q4ACU6 Gm6018-201ENSMUST00000216090 1306 ntBASIC19.73■□□□□ 0.75
Shank3Q4ACU6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shank3Q4ACU6 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC19.73■□□□□ 0.75
Shank3Q4ACU6 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Shank3Q4ACU6 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shank3Q4ACU6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shank3Q4ACU6 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Shank3Q4ACU6 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shank3Q4ACU6 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Shank3Q4ACU6 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shank3Q4ACU6 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shank3Q4ACU6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Shank3Q4ACU6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shank3Q4ACU6 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shank3Q4ACU6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Shank3Q4ACU6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Shank3Q4ACU6 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC19.72■□□□□ 0.75
Shank3Q4ACU6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Shank3Q4ACU6 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shank3Q4ACU6 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Shank3Q4ACU6 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shank3Q4ACU6 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC19.72■□□□□ 0.75
Shank3Q4ACU6 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shank3Q4ACU6 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shank3Q4ACU6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC19.72■□□□□ 0.75
Shank3Q4ACU6 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shank3Q4ACU6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shank3Q4ACU6 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Shank3Q4ACU6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shank3Q4ACU6 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shank3Q4ACU6 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shank3Q4ACU6 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shank3Q4ACU6 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shank3Q4ACU6 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC19.71■□□□□ 0.75
Shank3Q4ACU6 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC19.71■□□□□ 0.75
Shank3Q4ACU6 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Shank3Q4ACU6 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shank3Q4ACU6 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shank3Q4ACU6 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shank3Q4ACU6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shank3Q4ACU6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shank3Q4ACU6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shank3Q4ACU6 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shank3Q4ACU6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Shank3Q4ACU6 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Shank3Q4ACU6 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC19.71■□□□□ 0.75
Shank3Q4ACU6 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Shank3Q4ACU6 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC19.71■□□□□ 0.75
Shank3Q4ACU6 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shank3Q4ACU6 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shank3Q4ACU6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shank3Q4ACU6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shank3Q4ACU6 Grk6-207ENSMUST00000225925 2769 ntBASIC19.7■□□□□ 0.74
Shank3Q4ACU6 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms