Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Shisa3Q3UPR0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa3Q3UPR0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa3Q3UPR0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa3Q3UPR0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa3Q3UPR0 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.82□□□□□ -0.2
Shisa3Q3UPR0 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa3Q3UPR0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa3Q3UPR0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa3Q3UPR0 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa3Q3UPR0 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa3Q3UPR0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shisa3Q3UPR0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Shisa3Q3UPR0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Gm13559-201ENSMUST00000120476 863 ntBASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shisa3Q3UPR0 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Actl10-202ENSMUST00000226583 1501 ntBASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.8□□□□□ -0.2
Shisa3Q3UPR0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shisa3Q3UPR0 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms