Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Naf1Q3UMQ8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Naf1Q3UMQ8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Naf1Q3UMQ8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Naf1Q3UMQ8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Naf1Q3UMQ8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.18
Naf1Q3UMQ8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Naf1Q3UMQ8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Naf1Q3UMQ8 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Naf1Q3UMQ8 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Naf1Q3UMQ8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Naf1Q3UMQ8 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Naf1Q3UMQ8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Naf1Q3UMQ8 Gm12350-201ENSMUST00000121208 462 ntBASIC16.2■□□□□ 0.18
Naf1Q3UMQ8 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Naf1Q3UMQ8 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.2■□□□□ 0.18
Naf1Q3UMQ8 Gm43514-201ENSMUST00000198852 424 ntBASIC16.2■□□□□ 0.18
Naf1Q3UMQ8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Naf1Q3UMQ8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Naf1Q3UMQ8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Naf1Q3UMQ8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Naf1Q3UMQ8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Naf1Q3UMQ8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Naf1Q3UMQ8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Naf1Q3UMQ8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Naf1Q3UMQ8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Naf1Q3UMQ8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Naf1Q3UMQ8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Naf1Q3UMQ8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Naf1Q3UMQ8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Naf1Q3UMQ8 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Naf1Q3UMQ8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Naf1Q3UMQ8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Naf1Q3UMQ8 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.19■□□□□ 0.18
Naf1Q3UMQ8 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Naf1Q3UMQ8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.19■□□□□ 0.18
Naf1Q3UMQ8 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Naf1Q3UMQ8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.19■□□□□ 0.18
Naf1Q3UMQ8 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Naf1Q3UMQ8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.19■□□□□ 0.18
Naf1Q3UMQ8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Naf1Q3UMQ8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Naf1Q3UMQ8 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Naf1Q3UMQ8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Naf1Q3UMQ8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Naf1Q3UMQ8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Gm7230-201ENSMUST00000173026 815 ntBASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Gm27525-201ENSMUST00000184465 107 ntBASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Naf1Q3UMQ8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Naf1Q3UMQ8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Naf1Q3UMQ8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Naf1Q3UMQ8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.17■□□□□ 0.18
Naf1Q3UMQ8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Naf1Q3UMQ8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Naf1Q3UMQ8 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Naf1Q3UMQ8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Naf1Q3UMQ8 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Naf1Q3UMQ8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.17■□□□□ 0.18
Naf1Q3UMQ8 Gm8655-201ENSMUST00000221159 852 ntBASIC16.17■□□□□ 0.18
Naf1Q3UMQ8 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Naf1Q3UMQ8 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Naf1Q3UMQ8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Naf1Q3UMQ8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Naf1Q3UMQ8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Naf1Q3UMQ8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Naf1Q3UMQ8 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Naf1Q3UMQ8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Naf1Q3UMQ8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms