Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm26399-201ENSMUST00000103937 110 ntBASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Gm12151-201ENSMUST00000121374 290 ntBASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Gm25349-201ENSMUST00000177728 110 ntBASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Gm23616-201ENSMUST00000177797 110 ntBASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Gm25871-201ENSMUST00000177816 110 ntBASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Gm24752-201ENSMUST00000178240 110 ntBASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Gm24496-201ENSMUST00000178287 110 ntBASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Gm25649-201ENSMUST00000178476 110 ntBASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Gm25548-201ENSMUST00000178681 110 ntBASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Gm23147-201ENSMUST00000178841 110 ntBASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Gm26095-201ENSMUST00000179270 110 ntBASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Gm22171-201ENSMUST00000179283 110 ntBASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Gm23936-201ENSMUST00000179354 110 ntBASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Gm22619-201ENSMUST00000179516 110 ntBASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Gm25255-201ENSMUST00000179579 110 ntBASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Gm24755-201ENSMUST00000179691 110 ntBASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Gm26506-201ENSMUST00000179692 110 ntBASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Gm25086-201ENSMUST00000179931 110 ntBASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Gm23243-201ENSMUST00000180047 110 ntBASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Gm24659-201ENSMUST00000180212 110 ntBASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Gm24169-201ENSMUST00000180244 110 ntBASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Gm23689-201ENSMUST00000180354 110 ntBASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Gm27359-201ENSMUST00000184153 110 ntBASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Gm27785-201ENSMUST00000184268 110 ntBASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Gm27466-201ENSMUST00000184396 110 ntBASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Gm27703-201ENSMUST00000184836 110 ntBASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Sf3b2Q3UJB0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Sf3b2Q3UJB0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3b2Q3UJB0 Nudt18-203ENSMUST00000228768 1578 ntBASIC20.59■□□□□ 0.89
Sf3b2Q3UJB0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3b2Q3UJB0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3b2Q3UJB0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Sf3b2Q3UJB0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3b2Q3UJB0 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3b2Q3UJB0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3b2Q3UJB0 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC20.59■□□□□ 0.89
Sf3b2Q3UJB0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3b2Q3UJB0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Sf3b2Q3UJB0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3b2Q3UJB0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC20.59■□□□□ 0.89
Sf3b2Q3UJB0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Sf3b2Q3UJB0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3b2Q3UJB0 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3b2Q3UJB0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC20.58■□□□□ 0.89
Sf3b2Q3UJB0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.58■□□□□ 0.89
Sf3b2Q3UJB0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Sf3b2Q3UJB0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sf3b2Q3UJB0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sf3b2Q3UJB0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Sf3b2Q3UJB0 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC20.58■□□□□ 0.89
Sf3b2Q3UJB0 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC20.58■□□□□ 0.89
Sf3b2Q3UJB0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sf3b2Q3UJB0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.58■□□□□ 0.88
Sf3b2Q3UJB0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
Sf3b2Q3UJB0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Sf3b2Q3UJB0 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.58■□□□□ 0.88
Sf3b2Q3UJB0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Sf3b2Q3UJB0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sf3b2Q3UJB0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sf3b2Q3UJB0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sf3b2Q3UJB0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.58■□□□□ 0.88
Sf3b2Q3UJB0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sf3b2Q3UJB0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3b2Q3UJB0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.57■□□□□ 0.88
Sf3b2Q3UJB0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3b2Q3UJB0 Gm6018-201ENSMUST00000216090 1306 ntBASIC20.57■□□□□ 0.88
Sf3b2Q3UJB0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3b2Q3UJB0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3b2Q3UJB0 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3b2Q3UJB0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3b2Q3UJB0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3b2Q3UJB0 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC20.57■□□□□ 0.88
Sf3b2Q3UJB0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Sf3b2Q3UJB0 Rpph1-201ENSMUST00000175096 319 ntBASIC20.57■□□□□ 0.88
Sf3b2Q3UJB0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.57■□□□□ 0.88
Sf3b2Q3UJB0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3b2Q3UJB0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sf3b2Q3UJB0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sf3b2Q3UJB0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sf3b2Q3UJB0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sf3b2Q3UJB0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sf3b2Q3UJB0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Sf3b2Q3UJB0 Gm7336-201ENSMUST00000107041 1232 ntBASIC20.56■□□□□ 0.88
Sf3b2Q3UJB0 Gm15653-201ENSMUST00000119247 907 ntBASIC20.56■□□□□ 0.88
Sf3b2Q3UJB0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Sf3b2Q3UJB0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC20.56■□□□□ 0.88
Sf3b2Q3UJB0 AC122024.2-201ENSMUST00000220086 871 ntBASIC20.56■□□□□ 0.88
Sf3b2Q3UJB0 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sf3b2Q3UJB0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms