Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.78■□□□□ 0.6
Limch1Q3UH68 Gm12895-201ENSMUST00000122214 226 ntBASIC18.78■□□□□ 0.6
Limch1Q3UH68 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.78■□□□□ 0.6
Limch1Q3UH68 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Limch1Q3UH68 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Limch1Q3UH68 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Limch1Q3UH68 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Limch1Q3UH68 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Limch1Q3UH68 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Limch1Q3UH68 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Limch1Q3UH68 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Limch1Q3UH68 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Limch1Q3UH68 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Limch1Q3UH68 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Limch1Q3UH68 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.77■□□□□ 0.6
Limch1Q3UH68 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Limch1Q3UH68 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Limch1Q3UH68 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Limch1Q3UH68 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Limch1Q3UH68 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Limch1Q3UH68 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Limch1Q3UH68 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Limch1Q3UH68 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.77■□□□□ 0.6
Limch1Q3UH68 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.77■□□□□ 0.6
Limch1Q3UH68 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Limch1Q3UH68 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.77■□□□□ 0.6
Limch1Q3UH68 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Limch1Q3UH68 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Limch1Q3UH68 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Limch1Q3UH68 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Limch1Q3UH68 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Limch1Q3UH68 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Limch1Q3UH68 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Limch1Q3UH68 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Limch1Q3UH68 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
Limch1Q3UH68 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Limch1Q3UH68 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Limch1Q3UH68 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Limch1Q3UH68 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Limch1Q3UH68 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Limch1Q3UH68 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Limch1Q3UH68 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Limch1Q3UH68 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Limch1Q3UH68 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Limch1Q3UH68 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Limch1Q3UH68 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Limch1Q3UH68 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Limch1Q3UH68 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Limch1Q3UH68 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Limch1Q3UH68 Gm5864-201ENSMUST00000202263 970 ntBASIC18.76■□□□□ 0.59
Limch1Q3UH68 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Limch1Q3UH68 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Limch1Q3UH68 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Limch1Q3UH68 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.76■□□□□ 0.59
Limch1Q3UH68 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Limch1Q3UH68 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Limch1Q3UH68 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Limch1Q3UH68 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Limch1Q3UH68 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.76■□□□□ 0.59
Limch1Q3UH68 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Limch1Q3UH68 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Limch1Q3UH68 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Limch1Q3UH68 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Limch1Q3UH68 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Limch1Q3UH68 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Limch1Q3UH68 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Limch1Q3UH68 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Limch1Q3UH68 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Limch1Q3UH68 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.75■□□□□ 0.59
Limch1Q3UH68 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Limch1Q3UH68 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.75■□□□□ 0.59
Limch1Q3UH68 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.75■□□□□ 0.59
Limch1Q3UH68 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Limch1Q3UH68 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Limch1Q3UH68 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Limch1Q3UH68 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Limch1Q3UH68 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Limch1Q3UH68 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Limch1Q3UH68 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Limch1Q3UH68 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Limch1Q3UH68 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Limch1Q3UH68 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Limch1Q3UH68 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Limch1Q3UH68 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Limch1Q3UH68 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Limch1Q3UH68 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Limch1Q3UH68 Gm10052-201ENSMUST00000168019 960 ntBASIC18.74■□□□□ 0.59
Limch1Q3UH68 Mir8098-201ENSMUST00000184011 137 ntBASIC18.74■□□□□ 0.59
Limch1Q3UH68 Gm43347-201ENSMUST00000200226 580 ntBASIC18.74■□□□□ 0.59
Limch1Q3UH68 Gm44430-201ENSMUST00000203376 995 ntBASIC18.74■□□□□ 0.59
Limch1Q3UH68 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.74■□□□□ 0.59
Limch1Q3UH68 Gm7729-201ENSMUST00000050143 801 ntBASIC18.74■□□□□ 0.59
Limch1Q3UH68 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Limch1Q3UH68 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.74■□□□□ 0.59
Limch1Q3UH68 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Limch1Q3UH68 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Limch1Q3UH68 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Limch1Q3UH68 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Limch1Q3UH68 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Limch1Q3UH68 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 112.6 ms