Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43aQ3TL54 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trim43aQ3TL54 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.98■□□□□ 0.31
Trim43aQ3TL54 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43aQ3TL54 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trim43aQ3TL54 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trim43aQ3TL54 Gm43799-201ENSMUST00000201845 579 ntBASIC16.98■□□□□ 0.31
Trim43aQ3TL54 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.98■□□□□ 0.31
Trim43aQ3TL54 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.98■□□□□ 0.31
Trim43aQ3TL54 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43aQ3TL54 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43aQ3TL54 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43aQ3TL54 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43aQ3TL54 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43aQ3TL54 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trim43aQ3TL54 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43aQ3TL54 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.98■□□□□ 0.31
Trim43aQ3TL54 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43aQ3TL54 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43aQ3TL54 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim43aQ3TL54 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43aQ3TL54 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43aQ3TL54 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trim43aQ3TL54 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43aQ3TL54 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trim43aQ3TL54 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43aQ3TL54 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trim43aQ3TL54 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trim43aQ3TL54 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Trim43aQ3TL54 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43aQ3TL54 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43aQ3TL54 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43aQ3TL54 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43aQ3TL54 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Trim43aQ3TL54 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.97■□□□□ 0.31
Trim43aQ3TL54 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trim43aQ3TL54 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.97■□□□□ 0.31
Trim43aQ3TL54 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43aQ3TL54 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43aQ3TL54 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trim43aQ3TL54 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43aQ3TL54 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43aQ3TL54 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.97■□□□□ 0.31
Trim43aQ3TL54 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43aQ3TL54 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43aQ3TL54 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43aQ3TL54 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43aQ3TL54 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim43aQ3TL54 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43aQ3TL54 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43aQ3TL54 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43aQ3TL54 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trim43aQ3TL54 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43aQ3TL54 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43aQ3TL54 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
Trim43aQ3TL54 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.96■□□□□ 0.31
Trim43aQ3TL54 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43aQ3TL54 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43aQ3TL54 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43aQ3TL54 Gm9987-201ENSMUST00000069768 567 ntBASIC16.96■□□□□ 0.31
Trim43aQ3TL54 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trim43aQ3TL54 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trim43aQ3TL54 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Trim43aQ3TL54 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43aQ3TL54 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43aQ3TL54 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43aQ3TL54 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43aQ3TL54 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trim43aQ3TL54 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.96■□□□□ 0.31
Trim43aQ3TL54 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.96■□□□□ 0.31
Trim43aQ3TL54 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.96■□□□□ 0.31
Trim43aQ3TL54 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim43aQ3TL54 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Trim43aQ3TL54 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim43aQ3TL54 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43aQ3TL54 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43aQ3TL54 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43aQ3TL54 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43aQ3TL54 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43aQ3TL54 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43aQ3TL54 Gm13559-201ENSMUST00000120476 863 ntBASIC16.95■□□□□ 0.3
Trim43aQ3TL54 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.95■□□□□ 0.3
Trim43aQ3TL54 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.95■□□□□ 0.3
Trim43aQ3TL54 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43aQ3TL54 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43aQ3TL54 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43aQ3TL54 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43aQ3TL54 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43aQ3TL54 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43aQ3TL54 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim43aQ3TL54 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43aQ3TL54 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43aQ3TL54 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43aQ3TL54 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43aQ3TL54 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Trim43aQ3TL54 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43aQ3TL54 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim43aQ3TL54 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43aQ3TL54 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim43aQ3TL54 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms