Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cul4aQ3TCH7 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cul4aQ3TCH7 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cul4aQ3TCH7 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cul4aQ3TCH7 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cul4aQ3TCH7 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cul4aQ3TCH7 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cul4aQ3TCH7 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cul4aQ3TCH7 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cul4aQ3TCH7 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cul4aQ3TCH7 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Cul4aQ3TCH7 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cul4aQ3TCH7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Cul4aQ3TCH7 Mir6404-201ENSMUST00000183699 94 ntBASIC16.77■□□□□ 0.28
Cul4aQ3TCH7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Cul4aQ3TCH7 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.77■□□□□ 0.28
Cul4aQ3TCH7 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cul4aQ3TCH7 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Cul4aQ3TCH7 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cul4aQ3TCH7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cul4aQ3TCH7 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cul4aQ3TCH7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cul4aQ3TCH7 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cul4aQ3TCH7 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cul4aQ3TCH7 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cul4aQ3TCH7 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cul4aQ3TCH7 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cul4aQ3TCH7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cul4aQ3TCH7 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cul4aQ3TCH7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cul4aQ3TCH7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Cul4aQ3TCH7 Gm11355-201ENSMUST00000121120 306 ntBASIC16.76■□□□□ 0.27
Cul4aQ3TCH7 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.76■□□□□ 0.27
Cul4aQ3TCH7 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cul4aQ3TCH7 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.76■□□□□ 0.27
Cul4aQ3TCH7 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.76■□□□□ 0.27
Cul4aQ3TCH7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Cul4aQ3TCH7 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cul4aQ3TCH7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cul4aQ3TCH7 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cul4aQ3TCH7 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.76■□□□□ 0.27
Cul4aQ3TCH7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cul4aQ3TCH7 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cul4aQ3TCH7 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cul4aQ3TCH7 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.76■□□□□ 0.27
Cul4aQ3TCH7 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cul4aQ3TCH7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cul4aQ3TCH7 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cul4aQ3TCH7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.76■□□□□ 0.27
Cul4aQ3TCH7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cul4aQ3TCH7 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cul4aQ3TCH7 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cul4aQ3TCH7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cul4aQ3TCH7 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.75■□□□□ 0.27
Cul4aQ3TCH7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cul4aQ3TCH7 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cul4aQ3TCH7 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cul4aQ3TCH7 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cul4aQ3TCH7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cul4aQ3TCH7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.75■□□□□ 0.27
Cul4aQ3TCH7 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.75■□□□□ 0.27
Cul4aQ3TCH7 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cul4aQ3TCH7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.75■□□□□ 0.27
Cul4aQ3TCH7 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cul4aQ3TCH7 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.75■□□□□ 0.27
Cul4aQ3TCH7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cul4aQ3TCH7 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cul4aQ3TCH7 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cul4aQ3TCH7 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cul4aQ3TCH7 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cul4aQ3TCH7 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cul4aQ3TCH7 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms