Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Rab42Q0PD08 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab42Q0PD08 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab42Q0PD08 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab42Q0PD08 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rab42Q0PD08 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Rab42Q0PD08 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.16□□□□□ -0.14
Rab42Q0PD08 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab42Q0PD08 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rab42Q0PD08 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab42Q0PD08 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Rab42Q0PD08 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab42Q0PD08 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rab42Q0PD08 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.15□□□□□ -0.14
Rab42Q0PD08 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.15□□□□□ -0.14
Rab42Q0PD08 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab42Q0PD08 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab42Q0PD08 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab42Q0PD08 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Rab42Q0PD08 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab42Q0PD08 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab42Q0PD08 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rab42Q0PD08 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab42Q0PD08 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab42Q0PD08 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.15□□□□□ -0.14
Rab42Q0PD08 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.15□□□□□ -0.14
Rab42Q0PD08 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.15□□□□□ -0.14
Rab42Q0PD08 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab42Q0PD08 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab42Q0PD08 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab42Q0PD08 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab42Q0PD08 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rab42Q0PD08 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab42Q0PD08 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rab42Q0PD08 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Rab42Q0PD08 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Rab42Q0PD08 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Rab42Q0PD08 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Rab42Q0PD08 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Rab42Q0PD08 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab42Q0PD08 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab42Q0PD08 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab42Q0PD08 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rab42Q0PD08 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab42Q0PD08 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab42Q0PD08 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab42Q0PD08 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab42Q0PD08 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rab42Q0PD08 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.14□□□□□ -0.15
Rab42Q0PD08 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab42Q0PD08 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab42Q0PD08 Gm715-201ENSMUST00000117865 831 ntBASIC14.14□□□□□ -0.15
Rab42Q0PD08 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.14□□□□□ -0.15
Rab42Q0PD08 Gm9731-201ENSMUST00000209480 747 ntBASIC14.14□□□□□ -0.15
Rab42Q0PD08 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.14□□□□□ -0.15
Rab42Q0PD08 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab42Q0PD08 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab42Q0PD08 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rab42Q0PD08 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab42Q0PD08 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Rab42Q0PD08 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab42Q0PD08 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab42Q0PD08 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab42Q0PD08 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.14□□□□□ -0.15
Rab42Q0PD08 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab42Q0PD08 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab42Q0PD08 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rab42Q0PD08 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Gm7638-201ENSMUST00000121348 967 ntBASIC14.13□□□□□ -0.15
Rab42Q0PD08 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.13□□□□□ -0.15
Rab42Q0PD08 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Odf3b-204ENSMUST00000227834 930 ntBASIC14.13□□□□□ -0.15
Rab42Q0PD08 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Rab42Q0PD08 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms