Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tff1Q08423 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tff1Q08423 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tff1Q08423 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tff1Q08423 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tff1Q08423 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.31□□□□□ -0.28
Tff1Q08423 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Tff1Q08423 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
Tff1Q08423 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Tff1Q08423 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.3□□□□□ -0.28
Tff1Q08423 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tff1Q08423 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Tff1Q08423 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.29□□□□□ -0.28
Tff1Q08423 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.29□□□□□ -0.28
Tff1Q08423 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tff1Q08423 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tff1Q08423 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tff1Q08423 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tff1Q08423 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tff1Q08423 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tff1Q08423 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.29□□□□□ -0.28
Tff1Q08423 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Tff1Q08423 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tff1Q08423 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tff1Q08423 Gm13186-201ENSMUST00000118031 316 ntBASIC13.29□□□□□ -0.28
Tff1Q08423 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.29□□□□□ -0.28
Tff1Q08423 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tff1Q08423 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.29□□□□□ -0.28
Tff1Q08423 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.29□□□□□ -0.28
Tff1Q08423 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tff1Q08423 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tff1Q08423 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tff1Q08423 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tff1Q08423 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.29□□□□□ -0.28
Tff1Q08423 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Tff1Q08423 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tff1Q08423 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tff1Q08423 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tff1Q08423 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Tff1Q08423 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Tff1Q08423 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tff1Q08423 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tff1Q08423 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tff1Q08423 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tff1Q08423 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Tff1Q08423 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tff1Q08423 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tff1Q08423 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.28□□□□□ -0.28
Tff1Q08423 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tff1Q08423 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Tff1Q08423 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tff1Q08423 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Tff1Q08423 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tff1Q08423 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tff1Q08423 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tff1Q08423 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tff1Q08423 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.28□□□□□ -0.28
Tff1Q08423 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tff1Q08423 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tff1Q08423 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Tff1Q08423 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Tff1Q08423 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Tff1Q08423 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tff1Q08423 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tff1Q08423 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.28□□□□□ -0.28
Tff1Q08423 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tff1Q08423 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Tff1Q08423 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tff1Q08423 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms