Protein–RNA interactions for Protein: P97350

Pkp1, Plakophilin-1, mousemouse

Known RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp1P97350 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pkp1P97350 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Pkp1P97350 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Pkp1P97350 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pkp1P97350 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.68■□□□□ 0.58
Pkp1P97350 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.68■□□□□ 0.58
Pkp1P97350 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.68■□□□□ 0.58
Pkp1P97350 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Pkp1P97350 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pkp1P97350 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pkp1P97350 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Pkp1P97350 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pkp1P97350 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pkp1P97350 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Pkp1P97350 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pkp1P97350 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pkp1P97350 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pkp1P97350 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pkp1P97350 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pkp1P97350 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.67■□□□□ 0.58
Pkp1P97350 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pkp1P97350 Gm13312-201ENSMUST00000119631 718 ntBASIC18.67■□□□□ 0.58
Pkp1P97350 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.67■□□□□ 0.58
Pkp1P97350 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.67■□□□□ 0.58
Pkp1P97350 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pkp1P97350 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pkp1P97350 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pkp1P97350 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pkp1P97350 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pkp1P97350 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Pkp1P97350 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pkp1P97350 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pkp1P97350 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pkp1P97350 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.66■□□□□ 0.58
Pkp1P97350 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pkp1P97350 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pkp1P97350 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pkp1P97350 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pkp1P97350 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pkp1P97350 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.66■□□□□ 0.58
Pkp1P97350 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pkp1P97350 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pkp1P97350 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.66■□□□□ 0.58
Pkp1P97350 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Pkp1P97350 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.66■□□□□ 0.58
Pkp1P97350 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pkp1P97350 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pkp1P97350 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pkp1P97350 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pkp1P97350 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pkp1P97350 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pkp1P97350 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Pkp1P97350 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pkp1P97350 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pkp1P97350 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pkp1P97350 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pkp1P97350 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.65■□□□□ 0.58
Pkp1P97350 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pkp1P97350 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.65■□□□□ 0.58
Pkp1P97350 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Pkp1P97350 Gm27704-201ENSMUST00000185094 107 ntBASIC18.65■□□□□ 0.58
Pkp1P97350 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.65■□□□□ 0.58
Pkp1P97350 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.65■□□□□ 0.58
Pkp1P97350 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pkp1P97350 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pkp1P97350 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pkp1P97350 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pkp1P97350 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pkp1P97350 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pkp1P97350 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pkp1P97350 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pkp1P97350 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pkp1P97350 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.65■□□□□ 0.58
Pkp1P97350 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pkp1P97350 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pkp1P97350 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pkp1P97350 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pkp1P97350 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pkp1P97350 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pkp1P97350 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pkp1P97350 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pkp1P97350 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pkp1P97350 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pkp1P97350 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pkp1P97350 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Pkp1P97350 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pkp1P97350 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pkp1P97350 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pkp1P97350 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pkp1P97350 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pkp1P97350 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pkp1P97350 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pkp1P97350 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pkp1P97350 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.63■□□□□ 0.57
Pkp1P97350 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pkp1P97350 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pkp1P97350 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pkp1P97350 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pkp1P97350 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pkp1P97350 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms